Factsheet for Bra030232.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25602	Canola	nucleus	99.15	98.88
CDX89480	Canola	nucleus	97.75	97.75
Bra038518.1-P	Field mustard	nucleus	72.39	88.62
AT2G22490.2	Thale cress	nucleus	76.9	75.41
Solyc11g010460.1.1	Tomato	cytosol	43.66	49.68
Solyc05g051410.2.1	Tomato	nucleus	46.48	47.97
PGSC0003DMT400037827	Potato	nucleus	45.92	47.38
Bra037817.1-P	Field mustard	nucleus	37.46	47.16
Bra009031.1-P	Field mustard	nucleus	39.15	46.8
Bra024383.1-P	Field mustard	nucleus	40.56	46.75
GSMUA_Achr6P02210_001	Banana	plastid	32.39	46.18
VIT_00s0199g00210.t01	Wine grape	nucleus	45.63	45.89
KRH45568	Soybean	nucleus	44.51	45.66
KRG99448	Soybean	nucleus	45.63	45.25
Bra031858.1-P	Field mustard	nucleus	38.03	45.15
GSMUA_Achr10P...	Banana	nucleus	43.38	44.77
GSMUA_Achr9P15070_001	Banana	nucleus	43.66	44.29
KRH74510	Soybean	nucleus	44.79	44.04
KRH69654	Soybean	cytosol	29.86	43.62
GSMUA_Achr10P...	Banana	nucleus	39.44	43.61
GSMUA_Achr3P06730_001	Banana	nucleus	42.25	43.23
GSMUA_Achr8P23430_001	Banana	nucleus	42.25	43.23
GSMUA_Achr5P17920_001	Banana	nucleus	41.97	43.06
PGSC0003DMT400041637	Potato	nucleus	46.48	41.88
GSMUA_Achr5P22980_001	Banana	nucleus	41.13	41.83
GSMUA_Achr7P19040_001	Banana	cytosol, endoplasmic reticulum, nucleus	41.97	41.62
GSMUA_Achr7P12850_001	Banana	nucleus	40.56	39.89
TraesCS6B01G345300.1	Wheat	plastid	39.15	39.38
HORVU6Hr1G077500.1	Barley	nucleus	38.31	38.75
TraesCS6A01G314900.1	Wheat	nucleus	38.59	38.27
Zm00001d052185_P001	Maize	nucleus	38.03	37.5
Zm00001d018128_P001	Maize	nucleus	37.18	37.18
EES07560	Sorghum	nucleus	37.46	37.15
KXG19603	Sorghum	nucleus	36.06	36.78
Bra007901.1-P	Field mustard	nucleus	32.11	33.63
TraesCS6D01G294200.1	Wheat	nucleus	22.82	32.14
Bra029992.1-P	Field mustard	nucleus	29.01	29.26
Bra036051.1-P	Field mustard	nucleus	29.01	29.18
Bra012909.1-P	Field mustard	nucleus	26.48	28.66
Bra034198.1-P	Field mustard	nucleus	23.38	27.85
Bra017629.1-P	Field mustard	nucleus	27.61	26.63
Bra011501.1-P	Field mustard	nucleus	27.61	26.27
Bra034612.1-P	Field mustard	nucleus	27.04	26.09
Bra012146.1-P	Field mustard	nucleus	25.35	25.42
Bra017840.1-P	Field mustard	nucleus	23.66	24.63
Bra009612.1-P	Field mustard	cytosol	20.28	21.18
Bra005708.1-P	Field mustard	cytosol	20.28	20.99

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.4	EnsemblPlantsGene:Bra030232	EnsemblPlants:Bra030232.1	EnsemblPlants:Bra030232.1-P	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_C-dom	InterPro:Cyclin_N	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	UniProt:M4EN62	PFAM:PF00134	PFAM:PF02984	PIRSF:PIRSF001771	ScanProsite:PS00292
PANTHER:PTHR10177	PANTHER:PTHR10177:SF337	SMART:SM00385	SMART:SM01332	SUPFAM:SSF47954	UniParc:UPI0002544208
SEG:seg	:	:	:	:	:

Description

AT2G22490 (E=4e-127) CYCD2;1, ATCYCD2;1 | CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding

Coordinates

chrA04:-:9783098..9784770

Molecular Weight (calculated)

39974.3 Da

IEP (calculated)

4.852

GRAVY (calculated)

-0.408

Length

355 amino acids

Sequence
(BLAST)

001: MAENLTCGET SDSWITDNDD ETTIPGGGFT NDNHQLFSKD DNFNGDGSIP MMGSPSSPRE ERIREMLERE VEFSPGDEYL KRLRSGDWEL RLRNQALDWI
101: LKACAHYNFG TLCICLSMNY LDRFLASYDL PKDKTWAVQL LAVSCLSLAA KMEESDVPQT VELQVGDPKF VFEAKTIKRM ELLVLNTLNW RLQALTPFSF
201: IDYFIYKTNG HVSENLIYRS SQFILNTTKA IEFLDFRPSE VAAAAAMSAS ISGEIKCIDD DKTLSNLTYV KQERVMGCLS LMRSLTGDQL PGAVKLSPQQ
301: PRLTARVVPV SPIGVLEATC LSYKSDERTF ESCTNSSQSS PDTNNNNSNK RRRKQ

Best Arabidopsis Sequence Match ( AT2G22490.1 )
(BLAST)

001: MAENLACGET SESWIIDNDD DDINYGGGFT NEIDYNHQLF AKDDNFGGNG SIPMMGSSSS SLSEDRIKEM LVREIEFCPG TDYVKRLLSG DLDLSVRNQA
101: LDWILKVCAH YHFGHLCICL SMNYLDRFLT SYELPKDKDW AAQLLAVSCL SLASKMEETD VPHIVDLQVE DPKFVFEAKT IKRMELLVVT TLNWRLQALT
201: PFSFIDYFVD KISGHVSENL IYRSSRFILN TTKAIEFLDF RPSEIAAAAA VSVSISGETE CIDEEKALSS LIYVKQERVK RCLNLMRSLT GEENVRGTSL
301: SQEQARVAVR AVPASPVGVL EATCLSYRSE ERTVESCTNS SQSSPDNNNN NNNSNKRRRK Q

Arabidopsis Description

CYCD2;1Cyclin D21 [Source:UniProtKB/TrEMBL;Acc:F4IJJ3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.