Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30607 | Canola | nucleus | 98.3 | 98.3 |
| CDY17742 | Canola | nucleus | 96.6 | 96.06 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 44.48 | 91.28 |
| Bra029992.1-P | Field mustard | nucleus | 79.32 | 79.55 |
| Bra012909.1-P | Field mustard | nucleus | 71.67 | 77.13 |
| Bra012146.1-P | Field mustard | nucleus | 63.74 | 63.56 |
| KRH04529 | Soybean | nucleus | 52.12 | 49.6 |
| KRH57973 | Soybean | nucleus | 51.84 | 47.78 |
| KRH77050 | Soybean | nucleus, plastid | 44.48 | 47.01 |
| KRH28424 | Soybean | nucleus | 43.91 | 46.27 |
| Solyc02g092980.2.1 | Tomato | nucleus | 46.46 | 45.68 |
| PGSC0003DMT400064307 | Potato | nucleus | 46.18 | 44.9 |
| Bra011501.1-P | Field mustard | nucleus | 45.33 | 42.9 |
| PGSC0003DMT400031329 | Potato | nucleus | 39.09 | 42.86 |
| Bra017629.1-P | Field mustard | nucleus | 44.19 | 42.39 |
| Bra034612.1-P | Field mustard | nucleus | 43.91 | 42.12 |
| PGSC0003DMT400068629 | Potato | cytosol | 28.61 | 42.08 |
| Solyc02g064900.1.1 | Tomato | nucleus | 39.09 | 39.88 |
| Solyc02g064860.1.1 | Tomato | nucleus | 25.78 | 38.72 |
| Solyc02g064910.1.1 | Tomato | nucleus | 25.5 | 38.3 |
| PGSC0003DMT400068627 | Potato | nucleus | 32.86 | 37.66 |
| PGSC0003DMT400011487 | Potato | nucleus | 19.55 | 37.5 |
| Bra038518.1-P | Field mustard | nucleus | 28.05 | 34.14 |
| Bra007901.1-P | Field mustard | nucleus | 31.44 | 32.74 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 34.28 | 31.19 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 30.31 | 31.01 |
| GSMUA_Achr4P20220_001 | Banana | nucleus | 31.73 | 30.94 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 30.59 | 30.51 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 30.59 | 30.51 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 30.31 | 30.48 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 30.31 | 30.23 |
| Bra037817.1-P | Field mustard | nucleus | 24.08 | 30.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.91 | 29.97 |
| Bra009031.1-P | Field mustard | nucleus | 24.93 | 29.63 |
| Bra024383.1-P | Field mustard | nucleus | 25.78 | 29.55 |
| Os09t0111100-01 | Rice | cytosol | 30.31 | 29.4 |
| Bra030232.1-P | Field mustard | nucleus | 29.18 | 29.01 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 33.43 | 28.99 |
| Bra031858.1-P | Field mustard | nucleus | 24.36 | 28.76 |
| GSMUA_Achr3P01010_001 | Banana | nucleus | 33.14 | 28.75 |
| EER96424 | Sorghum | cytosol | 29.75 | 27.49 |
| Zm00001d019696_P001 | Maize | cytosol | 30.03 | 27.39 |
| Zm00001d005293_P001 | Maize | cytosol | 29.46 | 26.6 |
| Bra034198.1-P | Field mustard | nucleus | 20.11 | 23.83 |
| Bra017840.1-P | Field mustard | nucleus | 22.95 | 23.75 |
| Bra005708.1-P | Field mustard | cytosol | 21.53 | 22.16 |
| Bra009612.1-P | Field mustard | cytosol | 20.96 | 21.76 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.4 | EnsemblPlantsGene:Bra036051 | EnsemblPlants:Bra036051.1 | EnsemblPlants:Bra036051.1-P | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | UniProt:M4F4Q1 | PFAM:PF00134 | PFAM:PF02984 | PIRSF:PIRSF001771 | ScanProsite:PS00292 |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF216 | SMART:SM00385 | SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI0002542B62 |
| SEG:seg | : | : | : | : | : |
Description
AT3G50070 (E=9e-135) CYCD3;3 | CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinase
Coordinates
chrA09:-:24974529..24975864
Molecular Weight (calculated)
40742.3 Da
IEP (calculated)
4.489
GRAVY (calculated)
-0.225
Length
353 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEEEEEIQ NAPFCMLFCE EDSSGFDEED EDSCDKSDGK FPFFHLGFLD RSMSWEEDEL SSLIFKENDF RPSLTEEGVL DDEYLALCRE KAVDWILRVK
101: SHYGFSSLTA LLAVNYFDRF ITSRKFQTEF PWMSQLTALA CLSLAAKVEE VRVPLLVDLQ VEEASYVFEA KTIQRMELLI LSTLQWRMHP VTPISYLDHI
201: IRRFSFKSHQ QLEFLSRCES LLLSIVPDSR FLSYSSSELA AAIMVSVFRG FKTCDESEYE SQLMTLLKVD SEKVNKCYEL VFDHIPSKKR MQPASPTGVF
301: DASFSSDSSN ESWVVSASPS PEPLFKRRRV QEQQMRLSSV NRVFLDVFSS SPR
101: SHYGFSSLTA LLAVNYFDRF ITSRKFQTEF PWMSQLTALA CLSLAAKVEE VRVPLLVDLQ VEEASYVFEA KTIQRMELLI LSTLQWRMHP VTPISYLDHI
201: IRRFSFKSHQ QLEFLSRCES LLLSIVPDSR FLSYSSSELA AAIMVSVFRG FKTCDESEYE SQLMTLLKVD SEKVNKCYEL VFDHIPSKKR MQPASPTGVF
301: DASFSSDSSN ESWVVSASPS PEPLFKRRRV QEQQMRLSSV NRVFLDVFSS SPR
001: MALEEEEESQ NAPFCVLDGL FCEEESEFHE QVDLCDESVE KFPFLNLGLS DHDMLWDDDE LSTLISKQEP CLYDEILDDE FLVLCREKAL DWIFKVKSHY
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
101: GFNSLTALLA VNYFDRFITS RKFQTDKPWM SQLTALACLS LAAKVEEIRV PFLLDFQVEE ARYVFEAKTI QRMELLVLST LDWRMHPVTP ISFFDHIIRR
201: YSFKSHHQLE FLSRCESLLL SIIPDSRFLS FSPSVLATAI MVSVIRDLKM CDEAVYQSQL MTLLKVDSEK VNKCYELVLD HSPSKKRMMN WMQQPASPIG
301: VFDASFSSDS SNESWVVSAS ASVSSSPSSE PLLKRRRVQE QQMRLSSINR MFFDVLSSSP R
Arabidopsis Description
CYCD3-3CYCD3 [Source:UniProtKB/TrEMBL;Acc:A0A178VE15]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.