Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P20220_001 | Banana | nucleus | 55.77 | 62.71 |
| GSMUA_Achr3P13140_001 | Banana | nucleus | 56.76 | 56.76 |
| GSMUA_Achr1P09780_001 | Banana | cytosol | 49.63 | 52.06 |
| GSMUA_Achr2P05260_001 | Banana | nucleus | 42.75 | 50.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.87 | 46.06 |
| TraesCS5B01G158400.1 | Wheat | cytosol | 34.15 | 39.27 |
| TraesCS5D01G165900.1 | Wheat | cytosol | 33.66 | 38.7 |
| HORVU5Hr1G050270.8 | Barley | cytosol | 33.17 | 38.46 |
| TraesCS5A01G161000.1 | Wheat | cytosol | 33.42 | 38.42 |
| VIT_07s0129g01100.t01 | Wine grape | nucleus | 28.99 | 38.19 |
| KRH05626 | Soybean | cytosol | 19.9 | 37.67 |
| Os09t0111100-01 | Rice | cytosol | 33.66 | 37.64 |
| EER96424 | Sorghum | cytosol | 35.14 | 37.43 |
| Zm00001d019696_P001 | Maize | cytosol | 35.14 | 36.95 |
| Zm00001d005293_P001 | Maize | cytosol | 35.38 | 36.83 |
| PGSC0003DMT400039904 | Potato | nucleus | 28.99 | 36.65 |
| Solyc12g088650.1.1 | Tomato | nucleus | 28.5 | 35.69 |
| VIT_03s0180g00040.t01 | Wine grape | nucleus | 33.42 | 35.23 |
| KRH15412 | Soybean | cytosol | 23.34 | 35.19 |
| VIT_18s0001g09920.t01 | Wine grape | nucleus | 31.94 | 34.95 |
| Solyc01g107730.2.1 | Tomato | nucleus | 31.2 | 34.89 |
| PGSC0003DMT400066557 | Potato | nucleus | 30.47 | 34.64 |
| GSMUA_Achr6P02210_001 | Banana | plastid | 21.13 | 34.54 |
| PGSC0003DMT400020648 | Potato | nucleus | 28.01 | 34.34 |
| KRH77050 | Soybean | nucleus, plastid | 28.01 | 34.13 |
| KRH28424 | Soybean | nucleus | 28.01 | 34.03 |
| PGSC0003DMT400068629 | Potato | cytosol | 19.9 | 33.75 |
| Solyc02g092980.2.1 | Tomato | nucleus | 29.73 | 33.7 |
| PGSC0003DMT400031329 | Potato | nucleus | 26.54 | 33.54 |
| CDY02095 | Canola | nucleus | 27.03 | 33.54 |
| Bra012909.1-P | Field mustard | nucleus | 27.03 | 33.54 |
| CDY30607 | Canola | nucleus | 28.99 | 33.43 |
| Solyc04g078470.2.1 | Tomato | nucleus | 27.52 | 33.33 |
| Bra036051.1-P | Field mustard | nucleus | 28.75 | 33.14 |
| CDY30606 | Canola | cytosol, nucleus, plastid | 14.0 | 33.14 |
| CDY49278 | Canola | nucleus | 29.98 | 33.06 |
| CDY17742 | Canola | nucleus | 28.75 | 32.96 |
| Bra029992.1-P | Field mustard | nucleus | 28.5 | 32.95 |
| CDX83112 | Canola | nucleus | 28.5 | 32.95 |
| KRH61348 | Soybean | nucleus | 28.26 | 32.95 |
| KRH57973 | Soybean | nucleus | 30.96 | 32.9 |
| Bra017629.1-P | Field mustard | nucleus | 29.73 | 32.88 |
| CDY23022 | Canola | nucleus | 26.54 | 32.83 |
| PGSC0003DMT400064307 | Potato | nucleus | 29.24 | 32.78 |
| CDX72453 | Canola | nucleus | 28.99 | 32.78 |
| CDY01425 | Canola | nucleus | 28.5 | 32.77 |
| Bra012146.1-P | Field mustard | nucleus | 28.5 | 32.77 |
| CDY12825 | Canola | nucleus | 28.75 | 32.68 |
| CDX68573 | Canola | nucleus | 28.01 | 32.39 |
| CDY57741 | Canola | nucleus | 28.99 | 32.33 |
| CDX76265 | Canola | nucleus | 28.99 | 32.33 |
| Solyc02g064900.1.1 | Tomato | nucleus | 27.27 | 32.08 |
| KRH04529 | Soybean | nucleus | 29.24 | 32.08 |
| AT3G50070.1 | Thale cress | nucleus | 28.01 | 31.58 |
| AT4G34160.1 | Thale cress | nucleus | 28.99 | 31.38 |
| Bra011501.1-P | Field mustard | nucleus | 28.75 | 31.37 |
| CDX75405 | Canola | nucleus | 28.75 | 31.37 |
| KRG90996 | Soybean | nucleus | 30.22 | 31.3 |
| CDY69708 | Canola | nucleus | 28.75 | 31.28 |
| Bra034612.1-P | Field mustard | nucleus | 28.26 | 31.25 |
| Solyc02g064910.1.1 | Tomato | nucleus | 17.94 | 31.06 |
| Solyc02g064860.1.1 | Tomato | nucleus | 17.94 | 31.06 |
| GSMUA_Achr10P... | Banana | nucleus | 24.08 | 30.53 |
| KRH52038 | Soybean | nucleus | 27.03 | 30.39 |
| KRH35760 | Soybean | nucleus | 29.98 | 30.35 |
| GSMUA_Achr9P15070_001 | Banana | nucleus | 25.55 | 29.71 |
| GSMUA_Achr10P... | Banana | nucleus | 25.06 | 29.65 |
| GSMUA_Achr4P23840_001 | Banana | cytosol, nucleus, plasma membrane | 18.18 | 29.48 |
| GSMUA_Achr3P06730_001 | Banana | nucleus | 25.06 | 29.39 |
| PGSC0003DMT400011487 | Potato | nucleus | 13.27 | 29.35 |
| GSMUA_Achr8P23430_001 | Banana | nucleus | 24.82 | 29.11 |
| GSMUA_Achr10P... | Banana | nucleus | 25.31 | 29.01 |
| GSMUA_Achr9P28180_001 | Banana | nucleus | 21.13 | 28.38 |
| GSMUA_Achr7P26100_001 | Banana | nucleus | 25.55 | 28.34 |
| PGSC0003DMT400068627 | Potato | nucleus | 21.38 | 28.25 |
| AT5G67260.2 | Thale cress | nucleus | 28.01 | 28.22 |
| GSMUA_Achr6P10260_001 | Banana | cytosol | 25.06 | 28.1 |
| GSMUA_Achr5P22980_001 | Banana | nucleus | 24.08 | 28.08 |
| VIT_00s0194g00280.t01 | Wine grape | mitochondrion | 19.66 | 28.07 |
| GSMUA_Achr5P17920_001 | Banana | nucleus | 23.83 | 28.03 |
| GSMUA_Achr9P24600_001 | Banana | cytosol, nucleus, plasma membrane | 20.64 | 28.0 |
| GSMUA_Achr7P19040_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 24.57 | 27.93 |
| GSMUA_Achr6P07740_001 | Banana | nucleus | 21.62 | 27.67 |
| GSMUA_Achr6P24270_001 | Banana | nucleus | 20.64 | 27.63 |
| GSMUA_Achr3P06030_001 | Banana | cytosol | 19.9 | 27.36 |
| GSMUA_Achr3P21210_001 | Banana | nucleus | 23.34 | 26.91 |
| GSMUA_Achr2P22330_001 | Banana | nucleus | 23.34 | 26.69 |
| GSMUA_Achr7P12850_001 | Banana | nucleus | 23.59 | 26.59 |
| GSMUA_Achr10P... | Banana | cytosol | 16.46 | 26.48 |
| GSMUA_Achr9P30040_001 | Banana | cytosol, nucleus, peroxisome | 15.72 | 26.45 |
| GSMUA_Achr6P16910_001 | Banana | cytosol | 17.69 | 25.9 |
| GSMUA_Achr1P22570_001 | Banana | nucleus | 24.08 | 25.72 |
| GSMUA_Achr10P... | Banana | nucleus | 17.69 | 25.17 |
| GSMUA_Achr6P34040_001 | Banana | nucleus | 16.95 | 25.09 |
| GSMUA_Achr4P07110_001 | Banana | nucleus | 17.94 | 22.81 |
| GSMUA_Achr7P19980_001 | Banana | nucleus | 21.62 | 22.62 |
| GSMUA_Achr9P12120_001 | Banana | nucleus | 20.39 | 19.67 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P01010_001 | EnsemblPlants:GSMUA_Achr3T01010_001 | EnsemblPlantsGene:GSMUA_Achr3G01010_001 | Gene3D:1.10.472.10 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_C-dom | InterPro:Cyclin_N |
| PANTHER:PTHR10177 | PANTHER:PTHR10177:SF342 | PFAM:PF00134 | PFAM:PF02984 | SEG:seg | SMART:SM00385 |
| SMART:SM01332 | SUPFAM:SSF47954 | UniParc:UPI000296CA6B | UniProt:M0SAR9 | MapMan:13.1.1.1.4 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G01010_001]
Coordinates
chr3:+:758719..760603
Molecular Weight (calculated)
45104.0 Da
IEP (calculated)
7.938
GRAVY (calculated)
-0.294
Length
407 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKTAGCNET STSPWRRRGR KPEWNGEEEH RLPLLLRLAI EDSREESLVL AEEEEEQMEA LLPLTEDDWV EVLRSLAAKE RESELELASD DGGGCYLRSA
101: RKDAVEWVSR AAARHAFSPL TAVLAVNYLD RCFLSRAAGG GLRLQDDKPW MGRLAAVACL SLAAKVEETR VPLLIDLQAE EGKYVFEPRT IRRMELLVLA
201: ALRWRMNPVT PLSFIHHLLP RLRSKYKNAN TDPSAATGIA TARRCEAALL SAIADWRWVQ FPSSVWAAAA LLQASAVAAQ ESHCLISLLN VPMAKVEECH
301: QLMLESASAA ITGHKRKHSS SVFHYCSSPP SPIGVVGSCF GSESSSDSQA MRPPSPAAHP LQKQINGKRE RERERDYCAP FVFFSLGLTV KRSGMGKAHQ
401: LKPSFPP
101: RKDAVEWVSR AAARHAFSPL TAVLAVNYLD RCFLSRAAGG GLRLQDDKPW MGRLAAVACL SLAAKVEETR VPLLIDLQAE EGKYVFEPRT IRRMELLVLA
201: ALRWRMNPVT PLSFIHHLLP RLRSKYKNAN TDPSAATGIA TARRCEAALL SAIADWRWVQ FPSSVWAAAA LLQASAVAAQ ESHCLISLLN VPMAKVEECH
301: QLMLESASAA ITGHKRKHSS SVFHYCSSPP SPIGVVGSCF GSESSSDSQA MRPPSPAAHP LQKQINGKRE RERERDYCAP FVFFSLGLTV KRSGMGKAHQ
401: LKPSFPP
001: MAIRKEEESR EEQSNSFLLD ALYCEEEKWD DEGEEVEENS SLSSSSSPFV VLQQDLFWED EDLVTLFSKE EEQGLSCLDD VYLSTDRKEA VGWILRVNAH
101: YGFSTLAAVL AITYLDKFIC SYSLQRDKPW MLQLVSVACL SLAAKVEETQ VPLLLDFQVE ETKYVFEAKT IQRMELLILS TLEWKMHLIT PISFVDHIIR
201: RLGLKNNAHW DFLNKCHRLL LSVISDSRFV GYLPSVVAAA TMMRIIEQVD PFDPLSYQTN LLGVLNLTKE KVKTCYDLIL QLPVDRIGLQ IQIQSSKKRK
301: SHDSSSSLNS PSCVIDANPF NSDESSNDSW SASSCNPPTS SSSPQQQPPL KKMRGAEENE KKKPILHLPW AIVATP
101: YGFSTLAAVL AITYLDKFIC SYSLQRDKPW MLQLVSVACL SLAAKVEETQ VPLLLDFQVE ETKYVFEAKT IQRMELLILS TLEWKMHLIT PISFVDHIIR
201: RLGLKNNAHW DFLNKCHRLL LSVISDSRFV GYLPSVVAAA TMMRIIEQVD PFDPLSYQTN LLGVLNLTKE KVKTCYDLIL QLPVDRIGLQ IQIQSSKKRK
301: SHDSSSSLNS PSCVIDANPF NSDESSNDSW SASSCNPPTS SSSPQQQPPL KKMRGAEENE KKKPILHLPW AIVATP
Arabidopsis Description
CYCD3-1Cyclin-D3-1 [Source:UniProtKB/Swiss-Prot;Acc:P42753]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.