Factsheet for GSMUA_Achr3P11550_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	21.3	93.02
GSMUA_AchrUn_...	Banana	cytosol	52.06	89.89
GSMUA_Achr9P20740_001	Banana	peroxisome	70.57	88.63
Os06t0133800-01	Rice	extracellular, plastid	79.63	88.2
GSMUA_Achr3P11500_001	Banana	cytosol	16.51	86.71
TraesCS7A01G071100.2	Wheat	peroxisome	72.04	85.47
TraesCSU01G063400.1	Wheat	peroxisome	71.9	85.31
GSMUA_Achr1P19800_001	Banana	plastid	76.17	85.25
HORVU7Hr1G013600.3	Barley	peroxisome	76.43	84.16
Zm00001d045451_P001	Maize	plastid	82.16	83.83
VIT_16s0022g01440.t01	Wine grape	plastid	80.69	83.13
OQU75756	Sorghum	plastid	81.76	82.97
KRH65318	Soybean	nucleus	80.56	82.76
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	45.01	81.64
KXG21442	Sorghum	plastid	80.16	81.57
CDY68196	Canola	plastid	77.23	78.8
AT2G45290.1	Thale cress	plastid	77.63	78.68
VIT_15s0048g00370.t01	Wine grape	plastid	77.9	78.52
KRG93011	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	77.1	78.24
CDX74726	Canola	plastid	76.56	78.12
CDY48374	Canola	plastid	76.43	78.1
CDX89074	Canola	plastid	76.43	78.1
Bra014473.1-P	Field mustard	plastid	76.43	78.1
CDY41143	Canola	plastid	76.7	78.05
Bra004898.1-P	Field mustard	plastid	76.43	77.99
TraesCS7D01G066500.1	Wheat	plastid	77.36	77.99
Bra007555.1-P	Field mustard	plastid	76.56	77.91
CDX71785	Canola	plastid	76.56	77.81
KRH36260	Soybean	endoplasmic reticulum, nucleus, plastid	76.7	77.63
AT3G60750.1	Thale cress	plastid	76.56	77.6
PGSC0003DMT400056799	Potato	cytosol, plastid	75.23	76.25
PGSC0003DMT400018062	Potato	cytosol, extracellular	75.63	76.14
Solyc10g018300.1.1	Tomato	plastid	75.1	76.11
Bra003426.1-P	Field mustard	cytosol	45.94	74.68
EER89132	Sorghum	plastid	73.9	74.2
CDY56727	Canola	cytosol, mitochondrion, peroxisome, plastid	34.09	73.35
Solyc05g050970.2.1	Tomato	plastid	75.5	73.26
CDX67840	Canola	mitochondrion	46.07	68.65
CDY31467	Canola	plastid	21.3	65.04
GSMUA_Achr11P...	Banana	cytosol	11.05	40.69
KRH75956	Soybean	cytosol, peroxisome, plasma membrane, plastid	25.7	37.7
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	9.05	33.5

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0004802	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	EnsemblPlantsGene:GSMUA_Achr3G11550_001	EnsemblPlants:GSMUA_Achr3P11550_001	EnsemblPlants:GSMUA_Achr3T11550_001	InterPro:IPR009014
UniProt:M0SDS2	PFAM:PF00456	PFAM:PF02779	PFAM:PF02780	ScanProsite:PS00801	PANTHER:PTHR43522
PANTHER:PTHR43522:SF3	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00232
InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	InterPro:Transketolase_N	InterPro:Transketolase_bac-like	InterPro:Transketolase_fam
UniParc:UPI000296E6B4	SEG:seg	:	:	:	:

Description

Transketolase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G11550_001]

Coordinates

chr3:-:8571633..8575041

Molecular Weight (calculated)

81202.3 Da

IEP (calculated)

6.355

GRAVY (calculated)

-0.246

Length

751 amino acids

Sequence
(BLAST)

001: MAASSSVNAA RALVGLAVFD HGSSSNARPD RVALPAGGSA LSSHAAWSLT SSPRFQQCTS RRRPKPCSSR RAAPARAAAV ETLEAAATDA LVEKSVNTIR
101: FLAIDAVEKA NSGHPGLPMG CAPMGHILYD EVMNYNPKNP YWFNRDRFVL SAGHGCMLQY ALLHLAGYDS VKMEDLKQFR QWGSKTPGHP ENFETPGIEV
201: TTGPLGQGVA NAVGLALAER HLAARFNKPD NEIIDHYTYV MLGDGCQMEG IANEACSLAG HWGLGKLIAF YDDNHISIDG DTEIAFTEDA IDRFEALGWH
301: TIWVKNGNTG YDDIRAAIKE AKAVKDKPTL IKVTTTIGYG SPNKANTYSV HGSALGAKEV DATRQSLEWP YEPFYVPEDV KSHWSRHAPE GAALEAEWNA
401: RFAEYEEKYK EDAAELKAII SGELPAGWEK ALPRYTPESP ADATRNLSQQ NLNALAKVLP GLLGGSADLA SSNMTLLKMF GNFQKGTPEE RNVRFGVREH
501: GMGAICNGIA LHSPGLLPYC ATFFVFTDYM RAAMRISALS EAGVIYVMTH DSIGLGEDGP THQPIEHLIS FRAMPNILML RPADGNETAG AYKVAVLNRK
601: RPSVLALSRQ KLPQLPGTSI EDVEKGGYTI SDNSTGNKPD LILIGTGSEL EIAAKAADEL RKEGKTVRVV SLVCWELFDE QPDEYKESVF PAAVTARISI
701: EAGVTLGWEK YVGSKGKAIG IDRFGASAPA GRIYKEFGIT AESIIAAAKS L

Best Arabidopsis Sequence Match ( AT2G45290.2 )
(BLAST)

001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I

Arabidopsis Description

TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.