CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU75756	Sorghum	plastid	92.41	92.16
Os06t0133800-01	Rice	extracellular, plastid	83.6	91.0
TraesCS7A01G071100.2	Wheat	peroxisome	77.1	89.89
TraesCSU01G063400.1	Wheat	peroxisome	77.1	89.89
HORVU7Hr1G013600.3	Barley	peroxisome	82.11	88.86
GSMUA_AchrUn_...	Banana	cytosol	51.08	86.67
GSMUA_Achr9P20740_001	Banana	peroxisome	67.75	83.61
TraesCS7D01G066500.1	Wheat	plastid	84.28	83.49
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	18.97	81.4
GSMUA_Achr3P11550_001	Banana	plastid	81.57	80.16
GSMUA_Achr1P19800_001	Banana	plastid	69.11	76.01
EER89132	Sorghum	plastid	76.83	75.8
EES10537	Sorghum	plastid	73.04	74.24
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	39.57	70.53
OQU80099	Sorghum	plastid	5.83	51.81

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	UniProt:A0A1B6P733	GO:GO:0003674	GO:GO:0003824	GO:GO:0004802
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	InterPro:IPR009014	EnsemblPlants:KXG21442	ProteinID:KXG21442
ProteinID:KXG21442.1	PFAM:PF00456	PFAM:PF02779	PFAM:PF02780	ScanProsite:PS00801	PANTHER:PTHR43522
PANTHER:PTHR43522:SF7	MetaCyc:PWY-1861	MetaCyc:PWY-5723	MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-6901
MetaCyc:PWY-7560	SMART:SM00861	EnsemblPlantsGene:SORBI_3009G062800	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding
TIGRFAMs:TIGR00232	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	InterPro:Transketolase_N	InterPro:Transketolase_bac-like
InterPro:Transketolase_fam	UniParc:UPI0003C6FE13	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:6652275..6655838

Molecular Weight (calculated)

79336.9 Da

IEP (calculated)

6.368

GRAVY (calculated)

-0.207

Length

738 amino acids

Sequence
(BLAST)

001: MAAHSVAAAH ATISARAVAA HGAGVSAPGE RLGFLRLSSP VAGRGQLRSP LPARRQRVVR AAAAAETVEG NKAATGELLE KSVNTIRFLA IDAVEKANSG
101: HPGLPMGCAP VGHVLYDEVM RYNPKNPYWF NRDRFVLSAG HGCMLQYALL HLAGYDSVKE EDLKQFRQWG SSTPGHPENF ETPGVEVTTG PLGQGVANAV
201: GLALAEKHLA ARFNKPDSEI VDHYTYVILG DGCQMEGVAN EACSLAGHWG LGKLIAFYDD NHISIDGDTE IAFTEDVSTR FEALGWHTIW VKSGNTGYDD
301: IRAAIKEAKA VTDKPTLIKV TTTIGFGSPN KANSYSVHGS ALGAKEVEAT RQNLGWPYEP FFVPEDVKSH WSRHTPQGAA LEADWNAKFA EYEKKYAEDA
401: ATLKSLITGE FPTGWADALP KYTPESPADA TRNLSQQCLN ALTNVVPGLI GGSADLASSN MTLLKMFGDF QKDTPEERNV RFGVREHGMG AIANGIALHS
501: PGFVPYCATF FVFTDYMRGA MRISALSEAG VIYVMTHDSI GLGEDGPTHQ PIEHLVSFRA MPNILMLRPA DGNETAGAYK VAVLNRKRPS ILALSRQKLP
601: HLPGTSIEGV EKGGYTISDN STGNKPDLIV LSTGSELEIA AKAADELRKE GKTIRVVSFV SWELFEEQSD EYKESVLPEA VTARISIEAG STLGWQKYIG
701: AQGKAIGIDK FGASAPAGKI YKEYGITVEG VIAAAKSF

Best Arabidopsis Sequence Match ( AT2G45290.2 )
(BLAST)

001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I

Arabidopsis Description

TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.