Factsheet for GSMUA_AchrUn_randomP10150_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi

Predictor Summary:

plastid 5
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, secretory
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	83.14	34.54
CDY56727	Canola	cytosol, mitochondrion, peroxisome, plastid	65.12	32.09
Bra003426.1-P	Field mustard	cytosol	76.74	28.57
CDX67840	Canola	mitochondrion	77.33	26.39
GSMUA_Achr9P20740_001	Banana	peroxisome	84.88	24.41
TraesCSU01G063400.1	Wheat	peroxisome	80.23	21.8
TraesCS7A01G071100.2	Wheat	peroxisome	80.23	21.8
GSMUA_Achr3P11550_001	Banana	plastid	93.02	21.3
Os06t0133800-01	Rice	extracellular, plastid	83.72	21.24
HORVU7Hr1G013600.3	Barley	peroxisome	80.81	20.38
VIT_16s0022g01440.t01	Wine grape	plastid	83.72	19.75
KRH65318	Soybean	nucleus	83.72	19.7
KRH36260	Soybean	endoplasmic reticulum, nucleus, plastid	84.88	19.68
KRG93011	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	84.3	19.59
Zm00001d045451_P001	Maize	plastid	83.72	19.57
PGSC0003DMT400018062	Potato	cytosol, extracellular	84.3	19.44
OQU75756	Sorghum	plastid	83.14	19.32
KXG21442	Sorghum	plastid	81.4	18.97
Solyc05g050970.2.1	Tomato	plastid	84.3	18.73
PGSC0003DMT400056799	Potato	cytosol, plastid	80.23	18.62
CDX74726	Canola	plastid	79.65	18.61
VIT_15s0048g00370.t01	Wine grape	plastid	80.23	18.52
AT2G45290.1	Thale cress	plastid	79.65	18.49
Solyc10g018300.1.1	Tomato	plastid	79.65	18.49
Bra004898.1-P	Field mustard	plastid	79.07	18.48
EER89132	Sorghum	plastid	80.23	18.45
TraesCS7D01G066500.1	Wheat	plastid	79.65	18.39
CDY68196	Canola	plastid	78.49	18.34
Bra007555.1-P	Field mustard	plastid	77.33	18.02
CDY41143	Canola	plastid	77.33	18.02
CDX71785	Canola	plastid	77.33	18.0
AT3G60750.1	Thale cress	plastid	77.33	17.95
CDX89074	Canola	plastid	76.16	17.82
CDY48374	Canola	plastid	76.16	17.82
Bra014473.1-P	Field mustard	plastid	76.16	17.82
KRH75956	Soybean	cytosol, peroxisome, plasma membrane, plastid	47.67	16.02
GSMUA_Achr1P19800_001	Banana	plastid	57.56	14.75
GSMUA_Achr11P...	Banana	cytosol	12.21	10.29
GSMUA_AchrUn_...	Banana	cytosol	9.88	3.91
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	1.74	1.48
CDY31467	Canola	plastid	0.0	0.0
GSMUA_Achr3P11500_001	Banana	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP10150_001	EnsemblPlants:GSMUA_AchrUn_randomT10150_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG10150_001	Gene3D:3.40.50.920	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:IPR009014	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase_C	InterPro:Transketolase_fam
KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	PANTHER:PTHR43522	PANTHER:PTHR43522:SF7	PFAM:PF02780	SUPFAM:SSF52922
UniParc:UPI0002949560	UniProt:M0U7X5	MapMan:35.1	:	:	:

Description

Transketolase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG10150_001]

Coordinates

chrchrUn_random:+:48808611..48809616

Molecular Weight (calculated)

18136.9 Da

IEP (calculated)

5.983

GRAVY (calculated)

0.148

Length

172 amino acids

Sequence
(BLAST)

001: MRAAMRISAL CEAGVIYVMT HDSIVLALSR QKLPQLAGTS IEGVEKGGYI ISDNSSGNKP DLILIGTGSE LEIAAKAADE LRKEGKAVRV VSLVCWELFD
101: EQSDEFKESV FPAAVTARVS IEAGATLGWG KYIGSKGKAI GIDRFGASAP AGRIYKEFGI TAESIIAAAK SL

Best Arabidopsis Sequence Match ( AT2G45290.1 )
(BLAST)

001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I

Arabidopsis Description

TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.