CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004898.1-P	Field mustard	plastid	99.86	99.86
CDY68196	Canola	plastid	96.6	96.6
AT2G45290.1	Thale cress	plastid	87.91	87.31
Os06t0133800-01	Rice	extracellular, plastid	77.58	84.22
CDX89074	Canola	plastid	83.83	83.95
GSMUA_AchrUn_...	Banana	cytosol	49.59	83.91
CDX71785	Canola	plastid	84.24	83.9
CDY41143	Canola	plastid	84.1	83.88
CDY48374	Canola	plastid	83.7	83.81
TraesCSU01G063400.1	Wheat	peroxisome	71.06	82.62
TraesCS7A01G071100.2	Wheat	peroxisome	71.06	82.62
GSMUA_Achr9P20740_001	Banana	peroxisome	66.17	81.44
VIT_16s0022g01440.t01	Wine grape	plastid	80.57	81.34
HORVU7Hr1G013600.3	Barley	peroxisome	75.0	80.94
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	18.61	79.65
CDY56727	Canola	cytosol, mitochondrion, peroxisome, plastid	37.23	78.51
GSMUA_Achr3P11500_001	Banana	cytosol	15.22	78.32
GSMUA_Achr3P11550_001	Banana	plastid	78.12	76.56
PGSC0003DMT400056799	Potato	cytosol, plastid	77.04	76.52
Solyc10g018300.1.1	Tomato	plastid	76.9	76.38
VIT_15s0048g00370.t01	Wine grape	plastid	77.31	76.38
PGSC0003DMT400018062	Potato	cytosol, extracellular	75.54	74.53
TraesCS7D01G066500.1	Wheat	plastid	75.41	74.5
CDX67840	Canola	mitochondrion	50.14	73.21
GSMUA_Achr1P19800_001	Banana	plastid	66.58	73.03
Solyc05g050970.2.1	Tomato	plastid	75.54	71.83
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	38.04	67.63
CDY31467	Canola	plastid	22.01	65.85
CDY56721	Canola	cytosol	8.7	17.39

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	GO:A0A078CCC6	EnsemblPlants:CDX74726	ProteinID:CDX74726	ProteinID:CDX74726.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004802	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
EnsemblPlantsGene:GSBRNA2T00116688001	InterPro:IPR009014	PFAM:PF00456	PFAM:PF02779	PFAM:PF02780	ScanProsite:PS00801
ScanProsite:PS00802	PANTHER:PTHR43522	PANTHER:PTHR43522:SF7	MetaCyc:PWY-1861	MetaCyc:PWY-5723	MetaCyc:PWY-6891
MetaCyc:PWY-6892	MetaCyc:PWY-6901	MetaCyc:PWY-7560	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922
InterPro:THDP-binding	TIGRFAMs:TIGR00232	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS	InterPro:Transketolase_C
InterPro:Transketolase_N	InterPro:Transketolase_bac-like	InterPro:Transketolase_fam	UniPathway:UPA00064	UniParc:UPI0004EF4204	SEG:seg

Description

BnaA05g04720D

Coordinates

chrLK031802:+:335330..338335

Molecular Weight (calculated)

79694.0 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.276

Length

736 amino acids

Sequence
(BLAST)

001: MASLAFSQAL LSRATSHNGS NKHVSVPASS VLKTTSPRTN FFHSQRSAST SNHTLRPLVR ASAIETTDTT TDSTLVDKSV NTIRFLAIDA VEKAKSGHPG
101: LPMGCAPMSH ILYDEVMRYN PKNPYWFNRD RFVLSAGHGC MLQYALLHLA GYDSVREEDL KSFRQWGSKT PGHPENFETP GVEVTTGPLG QGIANAVGLA
201: LAEKHLAARF NKPDNEIVDH YTYSIIGDGC QMEGITNEVC SLAAHWGLGK LIAFYDDNHI SIDGDTEIAF TENVDKRFEA LGWHVIWVKN GNNGYDEIRA
301: AIKEAKAVKD KPTLIKVTTT IGYGSPNKAN SYSVHGAALG EKEVEATRNN LGWAYEPFQV PEDVKSHWSR HTPEGAALEA DWNAKFSAYE KKYPEEAEEL
401: KSIISGDLPA GWEKALPTYT PESPGDATRN LSQQCLNALA KSLPGFLGGS ADLASSNMTL LKAFGDFQNA TPEGRNLRFG VREHGMGAIC NGVALHSPGF
501: IPYCATFFVF TDYMRAAMRI AALSEAGVIY VMTHDSIGLG EDGPTHQPVE HLSSFRAMPN IMMFRPADGN ETAGAYKIAV ARRNTPSVLA LSRQKLPQLR
601: GTSIENVERG GYIITDNSNG NKPDVILVGT GSELEIAAKA GEELRKEGKS VRVVSFVCWE LFDEQTDAYK ESVLPSEVSA RVSIEAGSTF GWGKVVGGKG
701: KSIGIDSFGA SAPAGKLYKE FGITVEAVVA AAKSLI

Best Arabidopsis Sequence Match ( AT2G45290.2 )
(BLAST)

001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I

Arabidopsis Description

TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.