CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74726	Canola	plastid	96.6	96.6
AT2G45290.1	Thale cress	plastid	88.86	88.26
Os06t0133800-01	Rice	extracellular, plastid	78.53	85.25
CDX89074	Canola	plastid	84.65	84.76
CDY41143	Canola	plastid	84.92	84.69
CDX71785	Canola	plastid	84.92	84.57
CDY48374	Canola	plastid	84.24	84.35
GSMUA_AchrUn_...	Banana	cytosol	49.32	83.45
TraesCSU01G063400.1	Wheat	peroxisome	71.6	83.25
TraesCS7A01G071100.2	Wheat	peroxisome	71.6	83.25
HORVU7Hr1G013600.3	Barley	peroxisome	75.82	81.82
VIT_16s0022g01440.t01	Wine grape	plastid	80.43	81.21
GSMUA_Achr9P20740_001	Banana	peroxisome	65.62	80.77
CDY56727	Canola	cytosol, mitochondrion, peroxisome, plastid	37.5	79.08
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	18.34	78.49
GSMUA_Achr3P11500_001	Banana	cytosol	15.08	77.62
GSMUA_Achr3P11550_001	Banana	plastid	78.8	77.23
PGSC0003DMT400056799	Potato	cytosol, plastid	77.17	76.65
Solyc10g018300.1.1	Tomato	plastid	76.77	76.25
VIT_15s0048g00370.t01	Wine grape	plastid	76.9	75.97
TraesCS7D01G066500.1	Wheat	plastid	76.36	75.44
PGSC0003DMT400018062	Potato	cytosol, extracellular	76.09	75.07
CDX67840	Canola	mitochondrion	50.54	73.81
GSMUA_Achr1P19800_001	Banana	plastid	66.98	73.47
Solyc05g050970.2.1	Tomato	plastid	75.95	72.22
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	38.45	68.36
CDY31467	Canola	plastid	22.01	65.85
CDY56721	Canola	cytosol	8.7	17.39

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	GO:A0A078JRA8	UniProt:A0A078JRA8	EnsemblPlants:CDY68196	ProteinID:CDY68196
ProteinID:CDY68196.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004802	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00070067001	InterPro:IPR009014	PFAM:PF00456	PFAM:PF02779	PFAM:PF02780
ScanProsite:PS00801	ScanProsite:PS00802	PANTHER:PTHR43522	PANTHER:PTHR43522:SF7	MetaCyc:PWY-1861	MetaCyc:PWY-5723
MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-6901	MetaCyc:PWY-7560	SMART:SM00861	SUPFAM:SSF52518
SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00232	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS
InterPro:Transketolase_C	InterPro:Transketolase_N	InterPro:Transketolase_bac-like	InterPro:Transketolase_fam	UniPathway:UPA00064	UniParc:UPI0004EEE1C2
SEG:seg	:	:	:	:	:

Description

BnaAnng26460DBnaAnng26460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRA8]

Coordinates

chrLK036968:+:1938..5187

Molecular Weight (calculated)

79481.7 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.260

Length

736 amino acids

Sequence
(BLAST)

001: MASLAFSQAL LSRAISHNGS NKNVSVPASS VLKSTSPRTT FFHSQRSAST SSHSLRPLVR AAAVETTDAT TDSTLVDKSV NTIRFLAIDA VEKAKSGHPG
101: LPMGCAPMSH ILYDEVMRYN PKNPYWFNRD RFVLSAGHGC MLQYALLHLA GYDSVREEDL KSFRQWGSKT PGHPENFETP GVEVTTGPLG QGIANAVGLA
201: LAEKHLAARF NKPDSEIVDH YTYSIIGDGC QMEGITNEVC SLAAHWGLGK LIAFYDDNHI SIDGDTEIAF TENVDKRFEA LGWHVIWVKN GNNGYDEIRA
301: AIKEAKAVTN KPTLIKVTTT IGYGSPNKAN SYSVHGAALG EKEVEATRNN LGWPYEPFQV PEDVKSHWSR HTPEGAALEA DWNAKFTAYE KKYPEEAEEL
401: KSIISGDLPA GWEKALPTYT PESPGDATRN LSQQCLNALA KTLPGFLGGS ADLASSNMTL LKAFGDFQNA TPEGRNLRFG VREHGMGAIC NGVALHSPGF
501: IPYCATFFVF TDYMRAAMRI AALSEAGVIY VMTHDSIGLG EDGPTHQPVE HLSSFRAMPN IMMFRPADGN ETAGAYKIAV TRRNTPSVLA LSRQKLPQLP
601: GTSIENVERG GYTVSDNSTG NKPDVILVGT GSELEIAAKA GEELRKEGKN VRVVSFVCWE LFDEQPDAYK ESVLPSDVSA RVSIEAGSTF GWGKVVGGKG
701: KSIGIDSFGA SAPAGKLYEE FGITVEAVVA AAKSLI

Best Arabidopsis Sequence Match ( AT2G45290.2 )
(BLAST)

001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I

Arabidopsis Description

TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.