CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046962_P002	Maize	cytosol	33.33	71.3
OQU80099	Sorghum	plastid	16.26	48.19
GSMUA_Achr3P11500_001	Banana	cytosol	25.2	43.36
GSMUA_AchrUn_...	Banana	cytosol	61.38	34.71
GSMUA_Achr9P20740_001	Banana	peroxisome	63.41	26.09
TraesCS7A01G071100.2	Wheat	peroxisome	61.38	23.85
TraesCSU01G063400.1	Wheat	peroxisome	60.98	23.7
Os06t0133800-01	Rice	extracellular, plastid	65.04	23.6
GSMUA_Achr1P19800_001	Banana	plastid	64.23	23.55
CDY41143	Canola	plastid	69.92	23.31
CDX71785	Canola	plastid	69.92	23.27
CDY48374	Canola	plastid	69.51	23.27
CDX89074	Canola	plastid	69.51	23.27
HORVU7Hr1G013600.3	Barley	peroxisome	61.38	22.14
VIT_16s0022g01440.t01	Wine grape	plastid	65.45	22.09
CDY68196	Canola	plastid	65.85	22.01
CDX74726	Canola	plastid	65.85	22.01
VIT_15s0048g00370.t01	Wine grape	plastid	66.26	21.88
GSMUA_Achr3P11550_001	Banana	plastid	65.04	21.3
TraesCS7D01G066500.1	Wheat	plastid	62.6	20.67
CDX67840	Canola	mitochondrion	19.51	9.52
CDY56721	Canola	cytosol	9.76	6.52
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	4.07	2.42
CDY56727	Canola	cytosol, mitochondrion, peroxisome, plastid	1.22	0.86
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	0.0	0.0

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	Gene3D:3.40.50.970	MapMan:3.9.2.3
UniProt:A0A078H1V0	EnsemblPlants:CDY31467	ProteinID:CDY31467	ProteinID:CDY31467.1	EnsemblPlantsGene:GSBRNA2T00047740001	PFAM:PF00456
PANTHER:PTHR43522	PANTHER:PTHR43522:SF3	MetaCyc:PWY-6891	MetaCyc:PWY-6892	MetaCyc:PWY-7560	SUPFAM:SSF52518
InterPro:THDP-binding	InterPro:Transketolase_N	InterPro:Transketolase_fam	UniPathway:UPA00064	UniParc:UPI0004EEBDAE	SEG:seg

Description

BnaC05g15760DBnaC05g15760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1V0]

Coordinates

chrLK032273:+:87315..88863

Molecular Weight (calculated)

26665.5 Da

IEP (calculated)

8.218

GRAVY (calculated)

-0.264

Length

246 amino acids

Sequence
(BLAST)

001: MAASASFSVR ASVGTKVSPL ISIDDNVSVQ TKMSYKWQWK FKGNSIGPSG PQARQEEDLK SFRQWGSKTP GHPENFETPG IEVTTAGPLG QGIANAVGLA
101: LAEKHLAARF NKPGAKVDHY TYVILGDGCQ MEVFQKKAAF LAGHWGLGKL IAFYDDNHIS IDGDTAIAFT ENVDQRFEAL GWHVIWVKNG NTGYDEIRAA
201: IKEAKAVTDK PTLIKVTTTI GYGSPNKANS YSVHGACVYI TNTLDL

Best Arabidopsis Sequence Match ( AT1G74640.1 )
(BLAST)

001: MAASAAFSIS SPPFVPFTTK IRRPFLLLTP KYPKPVSVRA SVSSISIDEK LPVQTKTSNW QWKFKGNSIG IYYEEHEREK CESAKNILMI PTISDVSTVE
101: EWRSVAKDIV QRDGDVNWRA TIVDWPGLGY SARPKMDYDT DVMEKFVVDF MNSPESPMSQ SGNDDLVIIG GGHAATLALR ATQRGLLKPS AIAAVAPTWA
201: GPLPIVFGRD SSMVSRYGML RGTLRAPGVG WMMYNMLVSN EKSIESQYKS HVYADQTNVT DAIIQSRYEL TKQKGSRYVP AAFLTGLLDP VSSREEFLQL
301: FADLEGKLPV MVMSTKGAPK RSKAEMEALR GAKGVSKFVE VEGALLPQEE YPSLVAQELY NFLQETFAKC

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8L475]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.