Factsheet for GSMUA_Achr1P19800_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	59.76	92.18
GSMUA_Achr3P11500_001	Banana	cytosol	17.44	81.82
GSMUA_Achr9P20740_001	Banana	peroxisome	72.88	81.77
GSMUA_Achr3P11550_001	Banana	plastid	85.25	76.17
Os06t0133800-01	Rice	extracellular, plastid	76.45	75.66
VIT_16s0022g01440.t01	Wine grape	plastid	77.05	70.92
HORVU7Hr1G013600.3	Barley	peroxisome	71.68	70.53
TraesCSU01G063400.1	Wheat	peroxisome	66.47	70.46
TraesCS7A01G071100.2	Wheat	peroxisome	66.47	70.46
Zm00001d045451_P001	Maize	plastid	76.9	70.11
KRH65318	Soybean	nucleus	76.16	69.9
OQU75756	Sorghum	plastid	76.6	69.46
KXG21442	Sorghum	plastid	76.01	69.11
VIT_15s0048g00370.t01	Wine grape	plastid	74.81	67.38
CDY41143	Canola	plastid	74.07	67.34
Bra007555.1-P	Field mustard	plastid	73.92	67.21
AT2G45290.1	Thale cress	plastid	74.22	67.21
AT3G60750.1	Thale cress	plastid	74.22	67.21
CDX71785	Canola	plastid	73.92	67.12
KRG93011	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	73.92	67.03
CDY68196	Canola	plastid	73.47	66.98
CDY48374	Canola	plastid	73.03	66.67
Bra014473.1-P	Field mustard	plastid	73.03	66.67
CDX74726	Canola	plastid	73.03	66.58
Bra004898.1-P	Field mustard	plastid	73.03	66.58
CDX89074	Canola	plastid	72.88	66.53
KRH36260	Soybean	endoplasmic reticulum, nucleus, plastid	73.03	66.04
PGSC0003DMT400056799	Potato	cytosol, plastid	72.58	65.72
Solyc10g018300.1.1	Tomato	plastid	72.28	65.45
TraesCS7D01G066500.1	Wheat	plastid	72.58	65.37
PGSC0003DMT400018062	Potato	cytosol, extracellular	71.83	64.61
CDY31467	Canola	plastid	23.55	64.23
EER89132	Sorghum	plastid	70.49	63.24
Solyc05g050970.2.1	Tomato	plastid	71.98	62.4
Bra003426.1-P	Field mustard	cytosol	39.94	58.01
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	14.75	57.56
CDX67840	Canola	mitochondrion	40.09	53.37
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	32.79	53.14
CDY56727	Canola	cytosol, mitochondrion, peroxisome, plastid	27.27	52.44
GSMUA_Achr11P...	Banana	cytosol	10.73	35.29
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	9.99	33.0
KRH75956	Soybean	cytosol, peroxisome, plasma membrane, plastid	22.35	29.3

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr1G19800_001	EnsemblPlants:GSMUA_Achr1P19800_001	EnsemblPlants:GSMUA_Achr1T19800_001
InterPro:IPR009014	UniProt:M0S1D8	PFAM:PF00456	PFAM:PF02779	PFAM:PF02780	ScanProsite:PS00801
PANTHER:PTHR43522	PANTHER:PTHR43522:SF3	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding
TMHMM:TMhelix	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	InterPro:Transketolase_N	InterPro:Transketolase_fam
UniParc:UPI000294E754	SEG:seg	:	:	:	:

Description

Transketolase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G19800_001]

Coordinates

chr1:+:14856311..14859474

Molecular Weight (calculated)

72975.7 Da

IEP (calculated)

6.998

GRAVY (calculated)

-0.192

Length

671 amino acids

Sequence
(BLAST)

001: MAASSSVNAA QAIVGLAVSS HGSHSADRVA VPAGGFALSS LAGRSLTCSH SPRFQHQRRC PRQASRAARR AAPARAAAVE TLEAAATEAL VEKSINTIRF
101: LAIDAVEKAN SGHPGLPMGC APMGHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV QMEDIKQFRQ WGSRTPGHPE NFETPGVEVT
201: TGPLGQGVAN AVGLALAERH LAARFNKPDN EIVDHYTYVI LGDGCQMEGI ANEACSIAGH WGLGKLIAFY DDNHISIDGD TEIAFTEDVS ARFDALGWHT
301: IWVKNGNTGY DDIRAAIMEA KAVKDKPTLI KVTTTIGYGS PNKANSYSVH GSALGAKEVD ATRQNLGWPY EPFHVPEDIK SHWSRHVAEG ASLEAEWNAK
401: FAEYEKKYKE DAAELKAIVS GELPAGWEKA LPTYTPESPA DATRNLSQQN LNALAKVLPG LLGGSADLAS SNMTLLKMFG DFQKGTPEER NVRFGVREHG
501: MGAICNGIAL HSPGLLPYCA TFFVFTDYMR AAIRISALCE AGVIYVAVLN RKRPSVLALS RQKLPQLAGT SIEGVEKGGY IVSDNSSGNK PDLILMGTGS
601: ELEIAAKAAD ELRKTGKTVR VVSLVCWELF EEQSDEYKEI RHIGRQYHYR SQIALRFVIS FCSSLLFLFL S

Best Arabidopsis Sequence Match ( AT3G60750.1 )
(BLAST)

001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F

Arabidopsis Description

TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.