Factsheet for Bra007555.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G60750.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41143	Canola	plastid	99.46	99.46
Bra014473.1-P	Field mustard	plastid	93.9	94.29
AT3G60750.1	Thale cress	plastid	92.82	92.44
Zm00001d046962_P002	Maize	cytosol	13.69	87.83
Bra003426.1-P	Field mustard	cytosol	54.74	87.45
Os06t0133800-01	Rice	extracellular, plastid	77.78	84.66
Bra004898.1-P	Field mustard	plastid	83.88	84.1
TraesCSU01G063400.1	Wheat	peroxisome	72.09	84.04
TraesCS7A01G071100.2	Wheat	peroxisome	72.09	84.04
GSMUA_AchrUn_...	Banana	cytosol	49.19	83.45
HORVU7Hr1G013600.3	Barley	peroxisome	76.29	82.55
VIT_16s0022g01440.t01	Wine grape	plastid	80.62	81.62
GSMUA_Achr9P20740_001	Banana	peroxisome	65.99	81.44
PGSC0003DMT400056799	Potato	cytosol, plastid	78.86	78.54
Solyc10g018300.1.1	Tomato	plastid	78.86	78.54
GSMUA_Achr3P11500_001	Banana	cytosol	15.18	78.32
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	18.02	77.33
VIT_15s0048g00370.t01	Wine grape	plastid	78.05	77.32
TraesCS7D01G066500.1	Wheat	plastid	77.91	77.18
GSMUA_Achr3P11550_001	Banana	plastid	77.91	76.56
PGSC0003DMT400018062	Potato	cytosol, extracellular	77.37	76.54
GSMUA_Achr1P19800_001	Banana	plastid	67.21	73.92
Solyc05g050970.2.1	Tomato	plastid	77.37	73.77
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	38.08	67.87
OQU80099	Sorghum	plastid	5.56	49.4

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	EnsemblPlantsGene:Bra007555	EnsemblPlants:Bra007555.1	EnsemblPlants:Bra007555.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004802	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	InterPro:IPR009014
UniProt:M4CTL1	PFAM:PF00456	PFAM:PF02779	PFAM:PF02780	ScanProsite:PS00801	ScanProsite:PS00802
PANTHER:PTHR43522	PANTHER:PTHR43522:SF7	SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding
TIGRFAMs:TIGR00232	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS	InterPro:Transketolase_C	InterPro:Transketolase_N
InterPro:Transketolase_bac-like	InterPro:Transketolase_fam	UniParc:UPI00025428CB	SEG:seg	:	:

Description

AT3G60750 (E=0.0) | transketolase, putative

Coordinates

chrA09:+:29777548..29780250

Molecular Weight (calculated)

79469.1 Da

IEP (calculated)

6.272

GRAVY (calculated)

-0.206

Length

738 amino acids

Sequence
(BLAST)

001: MASTSSLALS QALLARAISH HGSDQRISLP SPFSRASASA SSRRRSNAAT TKPRSLRPLV VRAAAVDTLE PTTDASIVDK SVNTIRFLAI DAVEKAKSGH
101: PGLPMGCAPM AHILYDEVMR YNPKNPYWFN RDRFVLSAGH GCMLLYALLH LAGYDSVLEE DLKSFRQWGS KTPGHPENFE TPGIEVTTGP LGQGIANAVG
201: LALAEKHLAA RFNKPDAEVV DHYTYVILGD GCQMEGISNE AASLAGHWGL GKLIAFYDDN HISIDGDTEI AFTENVDQRF EALGWHVIWV KNGNTGYDEI
301: RAAIKEAKAV TDKPTLIKVT TTIGYGSPNK ANSYSVHGAA LGEKEVEATR NNLGWPYEPF KVPDEVKSHW SRHTPDGKAL ESDWNAAFSA YEKKYPEEAA
401: ELKSIITGEL PAGWEKALPT YTPESPGDAT RNLSQQCLNA LAKVVPGFLG GSADLASSNM TLLKAFGDFQ KATPEERNLR LGVREHGMGA ICNGIALHSP
501: GLIPYCATFF VFTDYMRGAM RISALSEAGV IYVMTHDSIG LGEDGPTHQP VEHLASFRAM PNTLMFRPAD GNETAGAYKI AVTKRKTPSI LALSRQKLPQ
601: LPGTSIEGVE KGGYTISDNS SGNKPDVILV GTGSELEIAA QAAEVLRKEG KTVRVVSFVC WELFDEQTDE YKESVLPSGV SARVSIEAAS TFGWGKIVGG
701: EGKSIGINSF GASAPAPLLY KEFGITVEAV VDAAKSFF

Best Arabidopsis Sequence Match ( AT3G60750.1 )
(BLAST)

001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F

Arabidopsis Description

TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.