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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol 79.02 25.98
CDY31467 Canola plastid 43.36 25.2
GSMUA_Achr11P... Banana cytosol, nucleus, plastid 32.87 23.15
GSMUA_Achr9P20740_001 Banana peroxisome 81.12 19.4
GSMUA_Achr1P19800_001 Banana plastid 81.82 17.44
GSMUA_Achr3P11550_001 Banana plastid 86.71 16.51
Solyc10g018300.1.1 Tomato plastid 79.72 15.38
CDY48374 Canola plastid 79.02 15.37
VIT_16s0022g01440.t01 Wine grape plastid 78.32 15.36
KRH65318 Soybean nucleus 78.32 15.32
KRG93011 Soybean endoplasmic reticulum, mitochondrion, nucleus, plastid 79.02 15.27
Bra014473.1-P Field mustard plastid 78.32 15.24
CDX74726 Canola plastid 78.32 15.22
Bra004898.1-P Field mustard plastid 78.32 15.22
CDY41143 Canola plastid 78.32 15.18
Bra007555.1-P Field mustard plastid 78.32 15.18
PGSC0003DMT400056799 Potato cytosol, plastid 78.32 15.11
AT3G60750.1 Thale cress plastid 78.32 15.11
AT2G45290.1 Thale cress plastid 78.32 15.11
CDX89074 Canola plastid 77.62 15.1
CDY68196 Canola plastid 77.62 15.08
VIT_15s0048g00370.t01 Wine grape plastid 78.32 15.03
CDX71785 Canola plastid 77.62 15.02
KRH36260 Soybean endoplasmic reticulum, nucleus, plastid 77.62 14.96
PGSC0003DMT400018062 Potato cytosol, extracellular 76.22 14.61
Solyc05g050970.2.1 Tomato plastid 76.22 14.08
Bra003426.1-P Field mustard cytosol 11.19 3.46
KRH75956 Soybean cytosol, peroxisome, plasma membrane, plastid 10.49 2.93
CDX67840 Canola mitochondrion 5.59 1.59
GSMUA_Achr11P... Banana cytosol 1.4 0.98
CDY56727 Canola cytosol, mitochondrion, peroxisome, plastid 1.4 0.57
GSMUA_Achr3P11490_001 Banana cytosol, mitochondrion, peroxisome, plastid 0.7 0.24
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 0.0 0.0
Protein Annotations
EnsemblPlants:GSMUA_Achr3P11500_001EnsemblPlants:GSMUA_Achr3T11500_001EnsemblPlantsGene:GSMUA_Achr3G11500_001Gene3D:3.40.50.970InterPro:THDP-bindingInterPro:Transketolase_N
InterPro:Transketolase_famKEGG:00030+2.2.1.1KEGG:00710+2.2.1.1KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7PANTHER:PTHR43522
PANTHER:PTHR43522:SF7PFAM:PF00456SUPFAM:SSF52518UniParc:UPI0002967169UniProt:M0SDR7MapMan:35.1
Description
Transketolase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr3G11500_001]
Coordinates
chr3:-:8531689..8532885
Molecular Weight (calculated)
15640.5 Da
IEP (calculated)
5.455
GRAVY (calculated)
-0.227
Length
143 amino acids
Sequence
(BLAST)
001: MGCAPMGHIL YDEVMNYNPK NPYWFNRDRF VLSAGHGCML QDALLHLAGY DSVKTRSNSV NGEAKLLGHP ENFETPGIEV TTGPLGQGVA NAVGLALAER
101: HLVSRFNKPD NEIIDHYTYV MFWDGCQMEG IANEACSLAG HGA
Best Arabidopsis Sequence Match ( AT2G45290.1 )
(BLAST)
001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I
Arabidopsis Description
TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.