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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plasma membrane, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 16.02 47.67
CDY56727 Canola cytosol, mitochondrion, peroxisome, plastid 27.15 39.83
Bra003426.1-P Field mustard cytosol 33.2 36.8
CDX67840 Canola mitochondrion 33.98 34.52
GSMUA_Achr3P11490_001 Banana cytosol, mitochondrion, peroxisome, plastid 27.73 34.3
KRH29475 Soybean cytosol 25.59 32.67
TraesCS7A01G071100.2 Wheat peroxisome 36.33 29.38
TraesCSU01G063400.1 Wheat peroxisome 36.13 29.23
KRH36260 Soybean endoplasmic reticulum, nucleus, plastid 42.19 29.11
KRG93011 Soybean endoplasmic reticulum, mitochondrion, nucleus, plastid 41.8 28.92
Os06t0133800-01 Rice extracellular, plastid 36.72 27.73
KRH65318 Soybean nucleus 39.26 27.5
GSMUA_Achr9P20740_001 Banana peroxisome 32.03 27.42
HORVU7Hr1G013600.3 Barley peroxisome 36.33 27.27
PGSC0003DMT400056799 Potato cytosol, plastid 38.48 26.59
Solyc10g018300.1.1 Tomato plastid 38.28 26.45
GSMUA_Achr3P11550_001 Banana plastid 37.7 25.7
PGSC0003DMT400018062 Potato cytosol, extracellular 37.3 25.6
AT3G60750.1 Thale cress plastid 36.91 25.51
Solyc05g050970.2.1 Tomato plastid 37.89 25.06
TraesCS7D01G066500.1 Wheat plastid 36.13 24.83
GSMUA_Achr1P19800_001 Banana plastid 29.3 22.35
Zm00001d046962_P002 Maize cytosol 4.88 21.74
GSMUA_AchrUn_... Banana cytosol 17.38 20.46
OQU80099 Sorghum plastid 1.95 12.05
GSMUA_Achr3P11500_001 Banana cytosol 2.93 10.49
Protein Annotations
KEGG:00030+2.2.1.1KEGG:00561+3.1.3.4KEGG:00564+3.1.3.4KEGG:00565+3.1.3.4KEGG:00600+3.1.3.4KEGG:00710+2.2.1.1
KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7Gene3D:3.40.50.920Gene3D:3.40.50.970MapMan:5.3.1UniProt:A0A0R0LIA9
EMBL:ACUP02000530EnsemblPlantsGene:GLYMA_01G120200GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0008195GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016311
GO:GO:0016787InterPro:IPR009014EnsemblPlants:KRH75956ProteinID:KRH75956ProteinID:KRH75956.1InterPro:Lipin_mid
PFAM:PF00456PFAM:PF16876PANTHER:PTHR43522PANTHER:PTHR43522:SF7MetaCyc:PWY-1861MetaCyc:PWY-5723
MetaCyc:PWY-6453MetaCyc:PWY-6891MetaCyc:PWY-6892MetaCyc:PWY-6901MetaCyc:PWY-7560MetaCyc:PWY-7782
SUPFAM:SSF52518SUPFAM:SSF52922InterPro:THDP-bindingTMHMM:TMhelixInterPro:Transketo_C/PFOR_IIInterPro:Transketolase_N
InterPro:Transketolase_famUniParc:UPI0006EE02CASEG:seg:::
Description
hypothetical protein
Coordinates
chr1:+:41309973..41312665
Molecular Weight (calculated)
56708.7 Da
IEP (calculated)
9.561
GRAVY (calculated)
-0.084
Length
512 amino acids
Sequence
(BLAST)
001: MGLVAAAEVF EAHRISAKEF RSSTLSIIKN ENLVLKFRER YLLWEKVAPL VLGITVFGLD LLIEPKDTIP VGLDDVVKAK NDAPGPASSG RRWRLWPMPF
101: RRVKTIDHTN SVSSEEVFVD SKSDFQTSIV EPSPTSAMPI SKFITISQVI TTIGFAYPNK ANSYSWMLQG RILDSHTSLS MCQKMSRSMD GEHWSRHTPK
201: GTKLEAEWNA KFVEYEKKYN EEAAKLKAII IGKLPGRKRA LLYIASLLII HLFASCIFHT YTPKSPADAT RNLVAIWISA LCEAGVIYPI EHLASFRAMP
301: NTFMLRPADG NDTAGSYKVV VVNKKRPSIV ALCWQKLTQL PRTSIEGVEK GGYLISDNSS SNKPDVILIG TGSKLEIVVA FAEDLWKEGK VVIVSDEFNE
401: SVLPASITAR VSIEAGSTFG CHNRAFAKRN TPGLSVRKNP EEDELYSEKG ALSQKSLTCT KRSIYFVRGV CIGIKSFSCL GFLKRESSKC MLCQGHSTVE
501: TGLTLKSLIV QG
Best Arabidopsis Sequence Match ( AT3G60750.1 )
(BLAST)
001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F
Arabidopsis Description
TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.