Factsheet for HORVU7Hr1G013600.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G60750.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G063400.1	Wheat	peroxisome	92.52	99.68
TraesCS7A01G071100.2	Wheat	peroxisome	92.23	99.37
TraesCS7D01G066500.1	Wheat	plastid	98.83	90.47
Os06t0133800-01	Rice	extracellular, plastid	89.74	90.27
GSMUA_AchrUn_...	Banana	cytosol	53.23	83.45
OQU75756	Sorghum	plastid	89.3	82.3
Zm00001d045451_P001	Maize	plastid	88.71	82.2
KXG21442	Sorghum	plastid	88.86	82.11
GSMUA_Achr9P20740_001	Banana	peroxisome	71.85	81.94
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	20.38	80.81
VIT_16s0022g01440.t01	Wine grape	plastid	83.43	78.05
AT3G60750.1	Thale cress	plastid	83.72	77.06
Bra014473.1-P	Field mustard	plastid	82.7	76.73
CDY41143	Canola	plastid	82.99	76.69
CDX89074	Canola	plastid	82.55	76.6
CDY48374	Canola	plastid	82.4	76.46
GSMUA_Achr3P11550_001	Banana	plastid	84.16	76.43
KRH65318	Soybean	nucleus	81.82	76.33
Bra007555.1-P	Field mustard	plastid	82.55	76.29
CDX71785	Canola	plastid	82.55	76.18
CDY68196	Canola	plastid	81.82	75.82
AT2G45290.1	Thale cress	plastid	81.96	75.44
CDX74726	Canola	plastid	80.94	75.0
Bra004898.1-P	Field mustard	plastid	80.79	74.86
Bra003426.1-P	Field mustard	cytosol	50.59	74.68
Solyc10g018300.1.1	Tomato	plastid	80.79	74.36
CDY56727	Canola	cytosol, mitochondrion, peroxisome, plastid	37.98	74.21
PGSC0003DMT400056799	Potato	cytosol, plastid	80.5	74.09
PGSC0003DMT400018062	Potato	cytosol, extracellular	79.91	73.06
KRG93011	Soybean	endoplasmic reticulum, mitochondrion, nucleus, plastid	79.03	72.84
KRH36260	Soybean	endoplasmic reticulum, nucleus, plastid	78.74	72.37
VIT_15s0048g00370.t01	Wine grape	plastid	79.03	72.35
GSMUA_Achr1P19800_001	Banana	plastid	70.53	71.68
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	42.82	70.53
HORVU6Hr1G003210.33	Barley	cytosol	33.43	70.37
Solyc05g050970.2.1	Tomato	plastid	79.62	70.16
CDX67840	Canola	mitochondrion	51.03	69.05
HORVU2Hr1G012790.1	Barley	peroxisome	75.66	67.89
HORVU5Hr1G007220.1	Barley	cytosol	15.54	63.86
CDY31467	Canola	plastid	22.14	61.38
KRH75956	Soybean	cytosol, peroxisome, plasma membrane, plastid	27.27	36.33

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	UniProt:A0A287VK33	GO:GO:0003674	GO:GO:0003824	GO:GO:0004802
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	EnsemblPlantsGene:HORVU7Hr1G013600	EnsemblPlants:HORVU7Hr1G013600.3	InterPro:IPR009014
PFAM:PF00456	PFAM:PF02779	PFAM:PF02780	ScanProsite:PS00801	PANTHER:PTHR43522	PANTHER:PTHR43522:SF7
SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00232	InterPro:Transketo_C/PFOR_II
InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	InterPro:Transketolase_N	InterPro:Transketolase_bac-like	InterPro:Transketolase_fam	UniParc:UPI000B4897E9
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:19588564..19591968

Molecular Weight (calculated)

73893.7 Da

IEP (calculated)

5.492

GRAVY (calculated)

-0.197

Length

682 amino acids

Sequence
(BLAST)

001: GLHRVRASAA VETVEAAATG ELLDKSVNAI RFLAIDAVEK AVSGHPGLPM GCAPMGHILY DEVMRYNPKN PYWFNRDRFV LSAGHGCMLQ YALLHLAGYD
101: AVKEEDLKQF RQWGSSTPGH PENFETPGVE VTTGPLGQGI ANAVGLALAE KHLAARFNKP DSEIVDHYTY CIVGDGCNME GILTEACSLA GHWGLGKLIV
201: FYDDNHISID GDTEIAFTED VSGRFEALGW HTLWVKNGND GYDEIRKAIQ EAKSVTDKPT MIKVTTTIGF GSPNKANSYA VHGAALGTSE VEATRANLGW
301: PYEPFFVPED VKSHWSRHIP QGAALEADWD AKFAQYEQKY PEDAATLKSI ITGELPAGWA DALPQYTTES PADATRNLSQ QCLNALAKVV PGLIGGSADL
401: ASSNMTLLKM FGDFQKDTPE ERNVRFGVRE HGMGAICNGI ALHTPGLIPY CATFFVFTDY MRGAMRISAL SEAGVIYVMT HDSIGLGEDG PTHQPIEHLV
501: SFRAMPNMLM FRPADGKETA GAYKVAVLNR KRPSILALSR QKLPHLPGTS IEGVAKGGYT ISDNSSGNKP DYIIMSTGSE VEIAVKAAEE LTKEGKTVRV
601: VSFVCWELFD EQSDEYKESV LPEAVTARIS IEAGSTLGWQ KYVGSKGKTI GIDKFGASAP APKIYKEYGI TAENVIAAAK SL

Best Arabidopsis Sequence Match ( AT3G60750.1 )
(BLAST)

001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F

Arabidopsis Description

TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.