Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004171_P002 | Maize | extracellular, plastid | 83.02 | 42.5 |
| HORVU2Hr1G012790.1 | Barley | peroxisome | 92.9 | 39.61 |
| Os04t0266900-01 | Rice | plastid | 84.26 | 38.24 |
| EES10537 | Sorghum | plastid | 83.64 | 37.33 |
| HORVU7Hr1G013600.3 | Barley | peroxisome | 70.37 | 33.43 |
| KRH29475 | Soybean | cytosol | 28.7 | 23.19 |
| HORVU5Hr1G007220.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G003210.33 | EnsemblPlantsGene:HORVU6Hr1G003210 | Gene3D:3.40.50.970 | InterPro:THDP-binding | InterPro:Transketolase_N | InterPro:Transketolase_fam |
| KEGG:00030+2.2.1.1 | KEGG:00710+2.2.1.1 | KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | ncoils:Coil | PANTHER:PTHR43522 |
| PANTHER:PTHR43522:SF3 | PFAM:PF00456 | SUPFAM:SSF52518 | UniParc:UPI000B469218 | UniProt:A0A287T5Q0 | MapMan:1.2.7 |
| MapMan:3.9.2.3 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:7632069..7634742
Molecular Weight (calculated)
35553.6 Da
IEP (calculated)
6.091
GRAVY (calculated)
-0.339
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAPLGHVL FDKFLHFNPA NHAWFDRDRF VLSAGHGCML HYALLHLAGY QGVTIDDLKA FQQWGSRTPG HPENFERDGV EVTTGPPGQG FANAVGLTLA
101: EKHLAARFNK PDLAVIDHYT YVILGDGCQM EGVANEAASL AGHWGLGKLI AFYDDNHISI DGSTAIAFTE DVLARYEALG WHTIWVENGN TGYDDIRAAI
201: KEAKEVKDKP TLIKVTTTIG YGSPNKASTH SVHGSALGSK EVEATRKNLS WAHEPFHVPD EVKRHWAHHL DEGASLEAEL NAKFAEYEKK YQQEATELNS
301: IISGKLPVGW ENALPTFTTT TPPS
101: EKHLAARFNK PDLAVIDHYT YVILGDGCQM EGVANEAASL AGHWGLGKLI AFYDDNHISI DGSTAIAFTE DVLARYEALG WHTIWVENGN TGYDDIRAAI
201: KEAKEVKDKP TLIKVTTTIG YGSPNKASTH SVHGSALGSK EVEATRKNLS WAHEPFHVPD EVKRHWAHHL DEGASLEAEL NAKFAEYEKK YQQEATELNS
301: IISGKLPVGW ENALPTFTTT TPPS
001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I
Arabidopsis Description
TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.