Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
plastid: 22065420 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046962_P002 | Maize | cytosol | 15.17 | 83.48 |
| HORVU6Hr1G003210.33 | Barley | cytosol | 42.5 | 83.02 |
| EES10537 | Sorghum | plastid | 94.63 | 82.51 |
| Os04t0266900-01 | Rice | plastid | 87.68 | 77.73 |
| TraesCS2A01G075200.1 | Wheat | plastid | 85.94 | 76.73 |
| TraesCS2D01G073900.1 | Wheat | plastid | 84.83 | 75.85 |
| TraesCS2B01G090100.1 | Wheat | plastid | 83.89 | 75.43 |
| HORVU2Hr1G012790.1 | Barley | peroxisome | 86.26 | 71.84 |
| HORVU5Hr1G007220.1 | Barley | cytosol | 18.17 | 69.28 |
| Zm00001d045451_P001 | Maize | plastid | 78.83 | 67.8 |
| KRH29475 | Soybean | cytosol | 35.55 | 56.11 |
Protein Annotations
| KEGG:00030+2.2.1.1 | KEGG:00710+2.2.1.1 | KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | MapMan:1.2.7 | Gene3D:3.40.50.920 |
| Gene3D:3.40.50.970 | MapMan:3.9.2.3 | UniProt:A0A1D6EEB5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004802 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | InterPro:IPR009014 | ProteinID:ONM18569.1 | ProteinID:ONM18570.1 |
| PFAM:PF00456 | PFAM:PF02779 | PFAM:PF02780 | PANTHER:PTHR43522 | PANTHER:PTHR43522:SF3 | SMART:SM00861 |
| SUPFAM:SSF52518 | SUPFAM:SSF52922 | InterPro:THDP-binding | TIGRFAMs:TIGR00232 | InterPro:Transketo_C/PFOR_II | InterPro:Transketolase-like_Pyr-bd |
| InterPro:Transketolase_C | InterPro:Transketolase_N | InterPro:Transketolase_bac-like | InterPro:Transketolase_fam | UniParc:UPI000221502A | EnsemblPlantsGene:Zm00001d004171 |
| EnsemblPlants:Zm00001d004171_P002 | EnsemblPlants:Zm00001d004171_T002 | : | : | : | : |
Description
Transketolase-1 chloroplastic
Coordinates
chr2:+:88958976..88963643
Molecular Weight (calculated)
69503.4 Da
IEP (calculated)
6.353
GRAVY (calculated)
-0.274
Length
633 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCAPLGHVL FDEFLRFNPK NPAWFDRDRF VLSAGHGCMI QYALLHLAGY NGVKMDDLKT FRQWRSRTPG HPENFETPGV EVTTGPLGQG FANAVGLALA
101: EKHLASRFNK TDMKVVDHYT YVILGDGCQM EGVSNEAASL AGHWGLGKLI AFYDDNHISI DGNTDIAFTE DVLARYEALG WHTIWVKNGN TGYDDIRTAI
201: NEAKGVKDKP TLIKVTTTIG FGSPNKANTY SVHGNALGSK EVEATRSNLG WFHEPFHVPD EVKRHWSRHI DEGASLEAEW NARFVEYEKK YNQEAAELKS
301: IISGELASGW ENALRNYTPE MSPDATRNLS QQCLNALAKV IPGFLGGSSD LATSNMTLLK KFGDFQRDTP EERNIRFGVR EHAMGAISNG IAVHSPGLIP
401: YCATFFVFTD YMRASIRLSA LSESGVIFVM THDSVGLGED GPTHQPVEHL FSLRAMPNIL MLRPADGNET SGAYKIAVLN RKRPSVIALS RQKLPQLRGT
501: SVDAVSKGGY IVSDDSSGNK PDFILIGTGS ELEIAENAAG ELRKKGRTVR VVSLVCWELF EEQPEEYKES VLPSEVTSRI SIEAGVTFGW EKYIGQKGKA
601: IGIDRFGASA PAGKIYKELG LTVEHVIAAA EAL
101: EKHLASRFNK TDMKVVDHYT YVILGDGCQM EGVSNEAASL AGHWGLGKLI AFYDDNHISI DGNTDIAFTE DVLARYEALG WHTIWVKNGN TGYDDIRTAI
201: NEAKGVKDKP TLIKVTTTIG FGSPNKANTY SVHGNALGSK EVEATRSNLG WFHEPFHVPD EVKRHWSRHI DEGASLEAEW NARFVEYEKK YNQEAAELKS
301: IISGELASGW ENALRNYTPE MSPDATRNLS QQCLNALAKV IPGFLGGSSD LATSNMTLLK KFGDFQRDTP EERNIRFGVR EHAMGAISNG IAVHSPGLIP
401: YCATFFVFTD YMRASIRLSA LSESGVIFVM THDSVGLGED GPTHQPVEHL FSLRAMPNIL MLRPADGNET SGAYKIAVLN RKRPSVIALS RQKLPQLRGT
501: SVDAVSKGGY IVSDDSSGNK PDFILIGTGS ELEIAENAAG ELRKKGRTVR VVSLVCWELF EEQPEEYKES VLPSEVTSRI SIEAGVTFGW EKYIGQKGKA
601: IGIDRFGASA PAGKIYKELG LTVEHVIAAA EAL
001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I
Arabidopsis Description
TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.