Factsheet for Zm00001d045451_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 20089766
extracellular: 20408568
plastid: 21196305
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663
cytosol: 28250383

msms PMID: 28250383 doi

CN Meisrimler, F Buck, S Lüthje

University Hospital Eppendorf, Institute of Clinical Chemistry, Campus Science, Martinistraße 52, D-20246 Hamburg, Germany. buck@uke.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. c_m_2406@yahoo.de., University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Oxidative Stress and Plant Proteomics Group, Ohnhorststraße 18, D-22609 Hamburg, Germany. s.luthje@botanik.uni-hamburg.de.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 21196305

XY Liu, YD Wu, ZY Shen, Z Shen, HH Li, XM Yu, XF Yan, CH Guo, BC Wang

Key Laboratory of Forest Tree Genetic Improvement and Biotechnology, Ministry of Education, Northeast Forestry University, Harbin, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046962_P002	Maize	cytosol	15.08	96.52
OQU75756	Sorghum	plastid	93.21	92.7
Os06t0133800-01	Rice	extracellular, plastid	84.38	91.59
TraesCS7A01G071100.2	Wheat	peroxisome	77.45	90.05
TraesCSU01G063400.1	Wheat	peroxisome	77.31	89.89
HORVU7Hr1G013600.3	Barley	peroxisome	82.2	88.71
GSMUA_AchrUn_...	Banana	cytosol	51.22	86.67
GSMUA_Achr9P20740_001	Banana	peroxisome	69.16	85.12
TraesCS7D01G066500.1	Wheat	plastid	84.92	83.89
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	19.57	83.72
GSMUA_Achr3P11550_001	Banana	plastid	83.83	82.16
Zm00001d004171_P002	Maize	extracellular, plastid	67.8	78.83
GSMUA_Achr1P19800_001	Banana	plastid	70.11	76.9
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	41.03	72.95

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	UniProt:A0A1D6NVZ7	ProteinID:AQL02289.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004802	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020
GO:GO:0016740	GO:GO:0019253	GO:GO:0030145	GO:GO:0046872	GO:GO:0050897	InterPro:IPR009014
PFAM:PF00456	PFAM:PF02779	PFAM:PF02780	ScanProsite:PS00801	PANTHER:PTHR43522	PANTHER:PTHR43522:SF7
SMART:SM00861	SUPFAM:SSF52518	SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00232	InterPro:Transketo_C/PFOR_II
InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	InterPro:Transketolase_N	InterPro:Transketolase_bac-like	InterPro:Transketolase_fam	UniParc:UPI0008423C02
EnsemblPlantsGene:Zm00001d045451	EnsemblPlants:Zm00001d045451_P001	EnsemblPlants:Zm00001d045451_T001	SEG:seg	:	:

Description

transketolase 1 transketolase 1

Coordinates

chr9:+:22640913..22645485

Molecular Weight (calculated)

79098.7 Da

IEP (calculated)

6.589

GRAVY (calculated)

-0.210

Length

736 amino acids

Sequence
(BLAST)

001: MATHSVAAAH ATIAARAGAA GAPAPAERLG FRRLGSPAGG LRSARRAPPA AASRRHRVVR AAAVETLQGK AATGELLEKS VNTIRFLAID AVEKANSGHP
101: GLPMGCAPMG HVLYDEVMRY NPKNPYWFNR DRFVLSAGHG CMLQYALLHL AGYDSVKEED LKQFRQWGSR TPGHPENFET PGVEVTTGPL GQGIANAVGL
201: ALAEKHLAAR FNKPDSEIVD HYTYVILGDG CQMEGIANEA CSLAGHWGLG KLIAFYDDNH ISIDGDTEIA FTEDVSTRFE ALGWHTIWVK NGNTGYDDIR
301: AAIKEAKAVT DKPTLIKVTT TIGFGSPNKA NSYSVHGSAL GAKEVEATRQ NLGWPYDTFF VPEDVKSHWS RHTPEGAALE ADWNAKFAEY EKKYADDAAT
401: LKSIITGELP TGWVDALPKY TPESPGDATR NLSQQCLNAL ANVVPGLIGG SADLASSNMT LLKMFGDFQK DTAEERNVRF GVREHGMGAI CNGIALHSPG
501: FVPYCATFFV FTDYMRGAMR ISALSEAGVI YVMTHDSIGL GEDGPTHQPI EHLVSFRAMP NILMLRPADG NETAGAYKVA VLNRKRPSIL ALSRQKLPHL
601: PGTSIEGVEK GGYTISDNST GNKPDIIVMG TGSELEIAAK AADELRKEGK TVRVVSFVSW ELFDEQSDEY KESVLPAAVT ARISIEAGST LGWQKYVGAQ
701: GKAIGIDKFG ASAPAGTIYK EYGITVESII AAAKSF

Best Arabidopsis Sequence Match ( AT3G60750.1 )
(BLAST)

001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F

Arabidopsis Description

TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.