CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045451_P001	Maize	plastid	92.7	93.21
KXG21442	Sorghum	plastid	92.16	92.41
Os06t0133800-01	Rice	extracellular, plastid	84.46	92.18
TraesCS7A01G071100.2	Wheat	peroxisome	77.43	90.52
TraesCSU01G063400.1	Wheat	peroxisome	77.3	90.36
HORVU7Hr1G013600.3	Barley	peroxisome	82.3	89.3
GSMUA_AchrUn_...	Banana	cytosol	51.22	87.13
TraesCS7D01G066500.1	Wheat	plastid	86.62	86.04
GSMUA_Achr9P20740_001	Banana	peroxisome	68.78	85.12
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	19.32	83.14
GSMUA_Achr3P11550_001	Banana	plastid	82.97	81.76
EER89132	Sorghum	plastid	77.97	77.14
GSMUA_Achr1P19800_001	Banana	plastid	69.46	76.6
EES10537	Sorghum	plastid	72.97	74.38
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	40.41	72.22
OQU80099	Sorghum	plastid	5.81	51.81

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	UniProt:A0A194YGV9	GO:GO:0003674	GO:GO:0003824	GO:GO:0004802
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	InterPro:IPR009014	ProteinID:KXG19207.1	EnsemblPlants:OQU75756
ProteinID:OQU75756	ProteinID:OQU75756.1	PFAM:PF00456	PFAM:PF02779	PFAM:PF02780	ScanProsite:PS00801
PANTHER:PTHR43522	PANTHER:PTHR43522:SF7	MetaCyc:PWY-1861	MetaCyc:PWY-5723	MetaCyc:PWY-6891	MetaCyc:PWY-6892
MetaCyc:PWY-6901	MetaCyc:PWY-7560	SMART:SM00861	EnsemblPlantsGene:SORBI_3010G023700	SUPFAM:SSF52518	SUPFAM:SSF52922
InterPro:THDP-binding	TIGRFAMs:TIGR00232	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C	InterPro:Transketolase_N
InterPro:Transketolase_bac-like	InterPro:Transketolase_fam	UniParc:UPI0003C6CC9A	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:1960014..1964275

Molecular Weight (calculated)

79576.2 Da

IEP (calculated)

6.400

GRAVY (calculated)

-0.213

Length

740 amino acids

Sequence
(BLAST)

001: MATHSVAAAH ATIAARAAPA AGASAPAERL GFRLSSLAGR GLRSPLPARR APSAAASRRQ RVVRAAAVET LEGKAATGEL LEKSVNTIRF LAIDAVEKAN
101: SGHPGLPMGC APMGHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV KEEDLKQFRQ WGSKTPGHPE NFETPGVEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDS EIVDHYTYVI LGDGCQMEGI ANEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTEDVS TRFEALGWHT IWVKNGNNGY
301: DDIRAAIKEA KAVTDKPTLI KVTTTIGFGS PNKANSYSVH GSALGAKEVE ATRQNLGWPY EPFFVPEDVK SHWSRHTPEG AALEADWNAK FAEYEKKYAD
401: DAATLKSIIT GEFPTGWADA LPKYTPESPG DATRNLSQQC LNALANVVPG LIGGSADLAS SNMTLLKMFG DFQKDTAEER NVRFGVREHG MGAICNGIAL
501: HSPGFVPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLVSF RAMPNILMLR PADGNETAGA YKVAVLNRKR PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DNSTGNKPDL IVLGTGSELE IAEKAADELR KEGKTVRVVS FVSWELFDEQ SDEYKESVLP AAVTARISIE AGSTLGWQKY
701: VGAQGKAIGI DKFGASAPAG TIYKEYGITV ESVIAAAKSF

Best Arabidopsis Sequence Match ( AT3G60750.1 )
(BLAST)

001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F

Arabidopsis Description

TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.