CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 1
plastid 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	18.45	80.23
GSMUA_Achr9P20740_001	Banana	peroxisome	63.77	79.77
GSMUA_AchrUn_...	Banana	cytosol	46.12	79.31
OQU75756	Sorghum	plastid	77.14	77.97
KXG21442	Sorghum	plastid	75.8	76.83
GSMUA_Achr3P11550_001	Banana	plastid	74.2	73.9
GSMUA_Achr1P19800_001	Banana	plastid	63.24	70.49
EES10537	Sorghum	plastid	66.84	68.87
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	36.23	65.46
OQU80099	Sorghum	plastid	4.68	42.17

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	EntrezGene:8068395	UniProt:C5Z3D3	EnsemblPlants:EER89132	ProteinID:EER89132
ProteinID:EER89132.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004802	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	InterPro:IPR009014	PFAM:PF00456	PFAM:PF02779	PFAM:PF02780	ScanProsite:PS00801
PANTHER:PTHR43522	PANTHER:PTHR43522:SF7	MetaCyc:PWY-1861	MetaCyc:PWY-5723	MetaCyc:PWY-6891	MetaCyc:PWY-6892
MetaCyc:PWY-6901	MetaCyc:PWY-7560	SMART:SM00861	EnsemblPlantsGene:SORBI_3010G024000	SUPFAM:SSF52518	SUPFAM:SSF52922
unigene:Sbi.20141	InterPro:THDP-binding	TIGRFAMs:TIGR00232	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_C
InterPro:Transketolase_N	InterPro:Transketolase_bac-like	InterPro:Transketolase_fam	UniParc:UPI0003C65133	RefSeq:XP_002437765.1	:

Description

hypothetical protein

Coordinates

chr10:-:1987224..1990835

Molecular Weight (calculated)

80858.2 Da

IEP (calculated)

6.373

GRAVY (calculated)

-0.157

Length

748 amino acids

Sequence
(BLAST)

001: MVGSSIAALH TTIGRHSGSP SRGSAPALVA MGGQVKFCHL MSLRNHNAYV ASSGHKRIIC AICTEAPESL TATGQLLAPE SLTATGQLLE RSVNTIRFLT
101: IDAVEKANSG HVGMSMGCAP MGHILYDEVM RYNPKNPYWF NRDRFVLSAG HGSMLQYALF HLAGYDSISV QELKQFSQLG SKTPGHPENF VTPGVEVTTG
201: PLGQGITNAV GLALAEKHLA GRFNKPDSEV VNHYTYVILG DGCQMEGISS EACSLAGHWG LGKLIAFYDD NHISVDGDTE IAFTEDVIAR FEAYGWHTLW
301: VKNGNTGYDD IREAIKEAKA VTDKPTLVKV TTTIGYGSPN KANSYSVHGG ALGTKEVEAT RQNLGWPYEP FFVPEDVKSH WSRHVPRGAA LEADWDAKFA
401: EYEKKYPEDA ATLKNIISGD LPAGWADDLP KYTAACPEAS TRNLSQHCLN ELAKVLPGFL GGSADVASSS MTLLKMFGNF QKYTPEERNL CFGVREHGMG
501: GICNGIALHS PGLIPYCSTY LAFSDYMRAA MRVSALSEAG VIYVMTHDSI GVGENGPTHQ PIEHLMSFRM MPNMLVLRPA DGNETAGAYR VAVLNRKRPS
601: VLALSRQNLP QLPGTSIEGV EKGGYVISDN SSSNKPDLIV LGTGSELEIA AKAADELRKE GKTVRVVSLV CWELFEEQSD EYKESVLPES VTARISIEAG
701: CALGWQKYVG PRGKIIAIDR FGASAPAEKI YMECGITVES VVAAARSF

Best Arabidopsis Sequence Match ( AT2G45290.2 )
(BLAST)

001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I

Arabidopsis Description

TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.