Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G075200.1 | Wheat | plastid | 96.45 | 95.77 |
| TraesCS2D01G073900.1 | Wheat | plastid | 92.19 | 91.67 |
| Zm00001d004171_P002 | Maize | extracellular, plastid | 75.43 | 83.89 |
| HORVU2Hr1G012790.1 | Barley | peroxisome | 90.34 | 83.68 |
| Os04t0266900-01 | Rice | plastid | 83.66 | 82.49 |
| EES10537 | Sorghum | plastid | 81.68 | 79.2 |
| HORVU5Hr1G007220.1 | Barley | cytosol | 17.9 | 75.9 |
| KRH29475 | Soybean | cytosol | 32.81 | 57.61 |
Protein Annotations
| KEGG:00030+2.2.1.1 | KEGG:00710+2.2.1.1 | KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | MapMan:1.2.7 | Gene3D:3.40.50.920 |
| Gene3D:3.40.50.970 | MapMan:3.9.2.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004802 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | InterPro:IPR009014 | PFAM:PF00456 | PFAM:PF02779 |
| PFAM:PF02780 | ScanProsite:PS00801 | PANTHER:PTHR43522 | PANTHER:PTHR43522:SF3 | SMART:SM00861 | SUPFAM:SSF52518 |
| SUPFAM:SSF52922 | InterPro:THDP-binding | TIGRFAMs:TIGR00232 | EnsemblPlantsGene:TraesCS2B01G090100 | EnsemblPlants:TraesCS2B01G090100.1 | InterPro:Transketo_C/PFOR_II |
| InterPro:Transketolase-like_Pyr-bd | InterPro:Transketolase_C | InterPro:Transketolase_N | InterPro:Transketolase_bac-like | InterPro:Transketolase_fam | TIGR:cd02012 |
| TIGR:cd07033 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:51081162..51084863
Molecular Weight (calculated)
75924.3 Da
IEP (calculated)
6.445
GRAVY (calculated)
-0.176
Length
704 amino acids
Sequence
(BLAST)
(BLAST)
001: MATPTPTPAP TSPACTPAAL AFGGRGGFLL ARARVGPGAG GRWVVRAQPA AAELVERSVN TIRFLAVDAV EKAKSGHPGL PMGCAPLGHV LFDEFLRFNP
101: ANHAWFDRDR LVLSAGHGCM LHYALLHLAG YQGVTIDDLK AFRQWGSRTP GHPENFETDG VEVTTGPLGQ GFANAVGLAL AEKHLAARFN KPDLTVVDHY
201: TYVILGDGCQ MEGVANEAAS LAGHWGLGKL IAFYDDNHIS IDGSTAIAFT EDHTIWVQNG NTGYDDIRAA IKEAKEVKDK PTLIKVTTTI GYGSPNKAST
301: HSVHGSALGS KEVEATRKNL SWAHEPFHVP DEVKRHWAHH LEEGASLEAE WNAKFAEYEK KYHQEAVELN SIISGKLPAG WEDALPKYTP ESPADATRNL
401: SQQCLNALAK VIPGFLGGSA DLASSNMTLL KMFGDFQKDT PEERNIRFGV REHAMGAICN GIAVHSPGLI PYCSTFFVFA DYMRAPIRLS ALSESGVIFV
501: MTHDSIGLGE DGPTHQPVEQ LFSLRAMPGI LILRPADGTE TSAAYRIAVI NRKRPSILAL SRQKLPQLEG TSVEGVAKGG YVISDNSSGN KPDLILISTG
601: SELEIAEKAA DQLRKEGKSV RVVSLVCWEL FEEQSEEYKE SVLPSDVTSR ISIEAGVTMG WEKYIGQKGK AVGIDRFGSS APAGKIYKEL GLTVENLIAT
701: VKSL
101: ANHAWFDRDR LVLSAGHGCM LHYALLHLAG YQGVTIDDLK AFRQWGSRTP GHPENFETDG VEVTTGPLGQ GFANAVGLAL AEKHLAARFN KPDLTVVDHY
201: TYVILGDGCQ MEGVANEAAS LAGHWGLGKL IAFYDDNHIS IDGSTAIAFT EDHTIWVQNG NTGYDDIRAA IKEAKEVKDK PTLIKVTTTI GYGSPNKAST
301: HSVHGSALGS KEVEATRKNL SWAHEPFHVP DEVKRHWAHH LEEGASLEAE WNAKFAEYEK KYHQEAVELN SIISGKLPAG WEDALPKYTP ESPADATRNL
401: SQQCLNALAK VIPGFLGGSA DLASSNMTLL KMFGDFQKDT PEERNIRFGV REHAMGAICN GIAVHSPGLI PYCSTFFVFA DYMRAPIRLS ALSESGVIFV
501: MTHDSIGLGE DGPTHQPVEQ LFSLRAMPGI LILRPADGTE TSAAYRIAVI NRKRPSILAL SRQKLPQLEG TSVEGVAKGG YVISDNSSGN KPDLILISTG
601: SELEIAEKAA DQLRKEGKSV RVVSLVCWEL FEEQSEEYKE SVLPSDVTSR ISIEAGVTMG WEKYIGQKGK AVGIDRFGSS APAGKIYKEL GLTVENLIAT
701: VKSL
001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I
Arabidopsis Description
TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.