Factsheet for Bra004898.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74726	Canola	plastid	99.86	99.86
AT2G45290.1	Thale cress	plastid	87.77	87.18
Zm00001d046962_P002	Maize	cytosol	13.32	85.22
Os06t0133800-01	Rice	extracellular, plastid	77.45	84.07
GSMUA_AchrUn_...	Banana	cytosol	49.59	83.91
Bra007555.1-P	Field mustard	plastid	84.1	83.88
Bra014473.1-P	Field mustard	plastid	83.15	83.27
TraesCSU01G063400.1	Wheat	peroxisome	70.92	82.46
TraesCS7A01G071100.2	Wheat	peroxisome	70.92	82.46
GSMUA_Achr9P20740_001	Banana	peroxisome	66.03	81.27
VIT_16s0022g01440.t01	Wine grape	plastid	80.43	81.21
HORVU7Hr1G013600.3	Barley	peroxisome	74.86	80.79
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	18.48	79.07
GSMUA_Achr3P11500_001	Banana	cytosol	15.22	78.32
Bra003426.1-P	Field mustard	cytosol	49.05	78.14
GSMUA_Achr3P11550_001	Banana	plastid	77.99	76.43
PGSC0003DMT400056799	Potato	cytosol, plastid	76.9	76.38
Solyc10g018300.1.1	Tomato	plastid	76.77	76.25
VIT_15s0048g00370.t01	Wine grape	plastid	77.17	76.24
PGSC0003DMT400018062	Potato	cytosol, extracellular	75.41	74.4
TraesCS7D01G066500.1	Wheat	plastid	75.27	74.36
GSMUA_Achr1P19800_001	Banana	plastid	66.58	73.03
Solyc05g050970.2.1	Tomato	plastid	75.41	71.71
GSMUA_Achr3P11490_001	Banana	cytosol, mitochondrion, peroxisome, plastid	37.91	67.39
OQU80099	Sorghum	plastid	5.71	50.6

Protein Annotations

KEGG:00030+2.2.1.1	KEGG:00710+2.2.1.1	KEGG:00730+2.2.1.7	KEGG:00900+2.2.1.7	MapMan:1.2.7	Gene3D:3.40.50.920
Gene3D:3.40.50.970	MapMan:3.9.2.3	EnsemblPlantsGene:Bra004898	EnsemblPlants:Bra004898.1	EnsemblPlants:Bra004898.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004802	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0016740
GO:GO:0046686	InterPro:IPR009014	UniProt:M4CL12	PFAM:PF00456	PFAM:PF02779	PFAM:PF02780
ScanProsite:PS00801	ScanProsite:PS00802	PANTHER:PTHR43522	PANTHER:PTHR43522:SF7	SMART:SM00861	SUPFAM:SSF52518
SUPFAM:SSF52922	InterPro:THDP-binding	TIGRFAMs:TIGR00232	InterPro:Transketo_C/PFOR_II	InterPro:Transketolase-like_Pyr-bd	InterPro:Transketolase_BS
InterPro:Transketolase_C	InterPro:Transketolase_N	InterPro:Transketolase_bac-like	InterPro:Transketolase_fam	UniParc:UPI0002547F14	SEG:seg

Description

AT2G45290 (E=0.0) | transketolase, putative

Coordinates

chrA05:+:2367652..2370453

Molecular Weight (calculated)

79652.0 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.283

Length

736 amino acids

Sequence
(BLAST)

001: MASLAFSQAL LSRATSHNGS NKHVSVPASS VLKTTSPRTN FFHSQRSAST SNHTLRPLVR ASAIETTDTT TDSTLVDKSV NTIRFLAIDA VEKAKSGHPG
101: LPMGCAPMSH ILYDEVMRYN PKNPYWFNRD RFVLSAGHGC MLQYALLHLA GYDSVREEDL KSFRQWGSKT PGHPENFETP GVEVTTGPLG QGIANAVGLA
201: LAEKHLAARF NKPDNEIVDH YTYSIIGDGC QMEGITNEVC SLAAHWGLGK LIAFYDDNHI SIDGDTEIAF TENVDKRFEA LGWHVIWVKN GNNGYDEIRA
301: AIKEAKAVKD KPTLIKVTTT IGYGSPNKAN SYSVHGAALG EKEVEATRNN LGWAYEPFQV PEDVKSHWSR HTPEGAALEA DWNAKFSAYE KKYPEEAEEL
401: KSIISGDLPA GWEKALPTYT PESPGDATRN LSQQCLNALA KSLPGFLGGS ADLASSNMTL LKAFGDFQNA TPEGRNLRFG VREHGMGAIC NGVALHSPGF
501: IPYCATFFVF TDYMRAAMRI AALSEAGVIY VMTHDSIGLG EDGPTHQPVE HLSSFRAMPN IMMFRPADGN ETAGAYKIAV ARRNTPSVLA LSRQKLPQLR
601: GTSIENVERG GYIITDNSNG NKPDVILVGT GSELEIAAKA GEELRKEGKS VRVVSFVCWE LFDEQTDAYK ESVLPSEGSA RVSIEAGSTF GWGKVVGGKG
701: KSIGIDSFGA SAPAGKLYKE FGITVEAVVA AAKSLI

Best Arabidopsis Sequence Match ( AT2G45290.2 )
(BLAST)

001: MASTSSLALS QALLTRAISH NGSENCVSIP AFSALKSTSP RTSGTISSRR RNASTISHSL RPLVRAAAVE AIVTSSDSSL VDKSVNTIRF LAIDAVEKAK
101: SGHPGLPMGC APMSHILYDE VMKYNPKNPY WFNRDRFVLS AGHGCMLQYA LLHLAGYDSV REEDLKSFRQ WGSKTPGHPE NFETPGVEAT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDN EIVDHYTYSI LGDGCQMEGI SNEVCSLAGH WGLGKLIAFY DDNHISIDGD TDIAFTESVD KRFEALGWHV IWVKNGNNGY
301: DEIRAAIREA KAVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFHVPEDVK SHWSRHTPEG AALEADWNAK FAAYEKKYPE
401: EAAELKSIIS GELPVGWEKA LPTYTPDSPG DATRNLSQQC LNALAKAVPG FLGGSADLAS SNMTMLKAFG NFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGFIPYCA TFFVFTDYMR AAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHLSSF RAMPNIMMFR PADGNETAGA YKIAVTKRKT PSVLALSRQK
601: LPQLPGTSIE SVEKGGYTIS DNSTGNKPDV ILIGTGSELE IAAQAAEKLR EQGKSVRVVS FVCWELFDEQ SDAYKESVLP SDVSARVSIE AGSTFGWGKI
701: VGGKGKSIGI DTFGASAPAG KLYKEFGITI EAMVEAAKSL I

Arabidopsis Description

TKL-2Transketolase-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4IW47]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.