Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0019g04500.t01 | Wine grape | plastid | 54.9 | 17.61 |
| PGSC0003DMT400038242 | Potato | plastid | 53.92 | 17.19 |
| GSMUA_Achr3P11490_001 | Banana | cytosol, mitochondrion, peroxisome, plastid | 34.8 | 17.15 |
| GSMUA_AchrUn_... | Banana | cytosol | 29.9 | 14.02 |
| Solyc01g018020.1.1 | Tomato | plastid | 53.43 | 13.85 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 10.29 | 12.21 |
| GSMUA_Achr9P20740_001 | Banana | peroxisome | 35.78 | 12.21 |
| GSMUA_Achr3P11550_001 | Banana | plastid | 40.69 | 11.05 |
| GSMUA_Achr1P19800_001 | Banana | plastid | 35.29 | 10.73 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, plastid | 3.43 | 3.45 |
| GSMUA_Achr3P11500_001 | Banana | cytosol | 0.98 | 1.4 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P02060_001 | EnsemblPlants:GSMUA_Achr11T02060_001 | EnsemblPlantsGene:GSMUA_Achr11G02060_001 | Gene3D:3.40.50.970 | InterPro:THDP-binding | InterPro:Transketolase-like_Pyr-bd |
| InterPro:Transketolase_fam | KEGG:00030+2.2.1.1 | KEGG:00710+2.2.1.1 | PANTHER:PTHR43522 | PANTHER:PTHR43522:SF5 | PFAM:PF02779 |
| SUPFAM:SSF52518 | UniParc:UPI000294DC74 | UniProt:M0RNN6 | MapMan:35.1 | : | : |
Description
Transketolase, putative [Source:GMGC_GENE;Acc:GSMUA_Achr11G02060_001]
Coordinates
chr11:+:1424676..1425575
Molecular Weight (calculated)
23131.5 Da
IEP (calculated)
9.103
GRAVY (calculated)
-0.608
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRMVKWEDR QPFHVIPLVY RCNIWKCKGK EHGGDLEKKW NSILRYYETK YKDETKDFEV LLDGGLPSGW EASLPKWSTS DPVDATRCDD FKLPASPRGR
101: NIRYGVREHA MALHGSGLKP FATTFLTFSD DMKNSIRLSA LSHAGVLYVF THDSIGLGED GPTPAGEATG RPSSYSSYVS LPTCRRKRES DLKQQFLINP
201: NVIT
101: NIRYGVREHA MALHGSGLKP FATTFLTFSD DMKNSIRLSA LSHAGVLYVF THDSIGLGED GPTPAGEATG RPSSYSSYVS LPTCRRKRES DLKQQFLINP
201: NVIT
001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F
Arabidopsis Description
TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.