Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 3
- mitochondrion 3
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400038242 | Potato | plastid | 68.87 | 68.44 |
Solyc01g018020.1.1 | Tomato | plastid | 71.07 | 57.43 |
GSMUA_Achr11P... | Banana | cytosol | 17.61 | 54.9 |
VIT_16s0022g01440.t01 | Wine grape | plastid | 50.94 | 44.44 |
VIT_15s0048g00370.t01 | Wine grape | plastid | 49.37 | 42.15 |
CDY56721 | Canola | cytosol | 7.86 | 13.59 |
Protein Annotations
KEGG:00030+2.2.1.1 | KEGG:00710+2.2.1.1 | KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | MapMan:1.2.7 | Gene3D:3.40.50.920 |
Gene3D:3.40.50.970 | MapMan:3.9.2.3 | ProteinID:CCB56171 | ProteinID:CCB56171.1 | UniProt:F6HNF2 | EMBL:FN595998 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | InterPro:IPR009014 | PFAM:PF00456 |
PFAM:PF02779 | PFAM:PF02780 | PANTHER:PTHR43522 | PANTHER:PTHR43522:SF5 | SMART:SM00861 | SUPFAM:SSF52518 |
SUPFAM:SSF52922 | InterPro:THDP-binding | InterPro:Transketo_C/PFOR_II | InterPro:Transketolase-like_Pyr-bd | InterPro:Transketolase_C | InterPro:Transketolase_N |
InterPro:Transketolase_fam | UniParc:UPI0002109E5F | ArrayExpress:VIT_13s0019g04500 | EnsemblPlantsGene:VIT_13s0019g04500 | EnsemblPlants:VIT_13s0019g04500.t01 | SEG:seg |
Description
No Description!
Coordinates
chr13:+:5933463..5936866
Molecular Weight (calculated)
70614.2 Da
IEP (calculated)
8.556
GRAVY (calculated)
-0.139
Length
636 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIVDAVQTA KAGHSGMPLG MAKVGYILYR HVMRYNPRNP KWFNRDRFVL SAGHGCLLQY ICLHLAGFQS VQLEDLQRLC LVVGPQVTLR MWLPMALKSL
101: QAPWARFNKP DAVIVDHRTF CIMGDGCVME GISHEAASLA AHWKLNKLTL IYDDNLNTID GATSLAFSED ISARFKALRW NTITVDDTHN DMEAIKNALL
201: SAFRETEKPT FIRVCKLSEK KGISKAHHGT FDEKDVKKMR RKVSWSDREP FHVIPMIYRL VFKSAAGKCR YKQSMEWHSR LCYYQTKYPQ EFVEFKILLD
301: GGLLPGWESS LPKFPTSDPV DATQGYSEKC LSQLAKVLPG LIRGSADLAT SNKAYLHGHE DFSQPNSPWG CNIRYGVREH AMAGISNGIA LHGSGLIPFA
401: ATFLVFSDYM KNSIRLSALS HAGVIYIMTH DSIGLGEDGP THQPAVEQLA GLRAVPQLLV FRPADGNETA GAYKVAVANR NVPSLIALSR QKVAANLEGT
501: SRASVERGGY IVSDNSEDKL PDIILIGTGS ELCLCDEGAK MLRQEGRTVR VVSLVCWRLF DMQPQQYKEF VLPPSVSKRV SVEAASPIGW REYVGEEGVV
601: VGVEEFGASG AYLDTFKKFG FTEGNITRIA KSLLSQ
101: QAPWARFNKP DAVIVDHRTF CIMGDGCVME GISHEAASLA AHWKLNKLTL IYDDNLNTID GATSLAFSED ISARFKALRW NTITVDDTHN DMEAIKNALL
201: SAFRETEKPT FIRVCKLSEK KGISKAHHGT FDEKDVKKMR RKVSWSDREP FHVIPMIYRL VFKSAAGKCR YKQSMEWHSR LCYYQTKYPQ EFVEFKILLD
301: GGLLPGWESS LPKFPTSDPV DATQGYSEKC LSQLAKVLPG LIRGSADLAT SNKAYLHGHE DFSQPNSPWG CNIRYGVREH AMAGISNGIA LHGSGLIPFA
401: ATFLVFSDYM KNSIRLSALS HAGVIYIMTH DSIGLGEDGP THQPAVEQLA GLRAVPQLLV FRPADGNETA GAYKVAVANR NVPSLIALSR QKVAANLEGT
501: SRASVERGGY IVSDNSEDKL PDIILIGTGS ELCLCDEGAK MLRQEGRTVR VVSLVCWRLF DMQPQQYKEF VLPPSVSKRV SVEAASPIGW REYVGEEGVV
601: VGVEEFGASG AYLDTFKKFG FTEGNITRIA KSLLSQ
001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F
Arabidopsis Description
TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.