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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 1
  • plastid 3
  • mitochondrion 3
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400038242 Potato plastid 68.87 68.44
Solyc01g018020.1.1 Tomato plastid 71.07 57.43
GSMUA_Achr11P... Banana cytosol 17.61 54.9
VIT_16s0022g01440.t01 Wine grape plastid 50.94 44.44
VIT_15s0048g00370.t01 Wine grape plastid 49.37 42.15
CDY56721 Canola cytosol 7.86 13.59
Protein Annotations
KEGG:00030+2.2.1.1KEGG:00710+2.2.1.1KEGG:00730+2.2.1.7KEGG:00900+2.2.1.7MapMan:1.2.7Gene3D:3.40.50.920
Gene3D:3.40.50.970MapMan:3.9.2.3ProteinID:CCB56171ProteinID:CCB56171.1UniProt:F6HNF2EMBL:FN595998
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152InterPro:IPR009014PFAM:PF00456
PFAM:PF02779PFAM:PF02780PANTHER:PTHR43522PANTHER:PTHR43522:SF5SMART:SM00861SUPFAM:SSF52518
SUPFAM:SSF52922InterPro:THDP-bindingInterPro:Transketo_C/PFOR_IIInterPro:Transketolase-like_Pyr-bdInterPro:Transketolase_CInterPro:Transketolase_N
InterPro:Transketolase_famUniParc:UPI0002109E5FArrayExpress:VIT_13s0019g04500EnsemblPlantsGene:VIT_13s0019g04500EnsemblPlants:VIT_13s0019g04500.t01SEG:seg
Description
No Description!
Coordinates
chr13:+:5933463..5936866
Molecular Weight (calculated)
70614.2 Da
IEP (calculated)
8.556
GRAVY (calculated)
-0.139
Length
636 amino acids
Sequence
(BLAST)
001: MLIVDAVQTA KAGHSGMPLG MAKVGYILYR HVMRYNPRNP KWFNRDRFVL SAGHGCLLQY ICLHLAGFQS VQLEDLQRLC LVVGPQVTLR MWLPMALKSL
101: QAPWARFNKP DAVIVDHRTF CIMGDGCVME GISHEAASLA AHWKLNKLTL IYDDNLNTID GATSLAFSED ISARFKALRW NTITVDDTHN DMEAIKNALL
201: SAFRETEKPT FIRVCKLSEK KGISKAHHGT FDEKDVKKMR RKVSWSDREP FHVIPMIYRL VFKSAAGKCR YKQSMEWHSR LCYYQTKYPQ EFVEFKILLD
301: GGLLPGWESS LPKFPTSDPV DATQGYSEKC LSQLAKVLPG LIRGSADLAT SNKAYLHGHE DFSQPNSPWG CNIRYGVREH AMAGISNGIA LHGSGLIPFA
401: ATFLVFSDYM KNSIRLSALS HAGVIYIMTH DSIGLGEDGP THQPAVEQLA GLRAVPQLLV FRPADGNETA GAYKVAVANR NVPSLIALSR QKVAANLEGT
501: SRASVERGGY IVSDNSEDKL PDIILIGTGS ELCLCDEGAK MLRQEGRTVR VVSLVCWRLF DMQPQQYKEF VLPPSVSKRV SVEAASPIGW REYVGEEGVV
601: VGVEEFGASG AYLDTFKKFG FTEGNITRIA KSLLSQ
Best Arabidopsis Sequence Match ( AT3G60750.1 )
(BLAST)
001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE NFETPGIEVT TGPLGQGIAN
201: AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY
301: DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE
401: EASELKSIIT GELPAGWEKA LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER NLRFGVREHG MGAICNGIAL
501: HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK
601: LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI
701: VGGKGKSIGI NSFGASAPAP LLYKEFGITV EAVVDAAKSF F
Arabidopsis Description
TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.