Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P11500_001 | Banana | cytosol | 23.15 | 32.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.02 | 14.94 |
| GSMUA_Achr9P20740_001 | Banana | peroxisome | 31.53 | 10.7 |
| GSMUA_Achr1P19800_001 | Banana | plastid | 33.0 | 9.99 |
| GSMUA_Achr3P11550_001 | Banana | plastid | 33.5 | 9.05 |
| GSMUA_Achr11P... | Banana | cytosol | 3.45 | 3.43 |
| CDY56721 | Canola | cytosol | 5.91 | 3.26 |
| GSMUA_Achr3P11490_001 | Banana | cytosol, mitochondrion, peroxisome, plastid | 4.93 | 2.42 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 1.48 | 1.74 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P02050_001 | EnsemblPlants:GSMUA_Achr11T02050_001 | EnsemblPlantsGene:GSMUA_Achr11G02050_001 | Gene3D:3.40.50.970 | InterPro:THDP-binding | InterPro:Transketolase_N |
| InterPro:Transketolase_fam | KEGG:00030+2.2.1.1 | KEGG:00710+2.2.1.1 | KEGG:00730+2.2.1.7 | KEGG:00900+2.2.1.7 | PANTHER:PTHR43522 |
| PANTHER:PTHR43522:SF5 | PFAM:PF00456 | SEG:seg | SUPFAM:SSF52518 | UniParc:UPI000295FD01 | UniProt:M0RNN5 |
| MapMan:35.1 | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G02050_001]
Coordinates
chr11:+:1423198..1424601
Molecular Weight (calculated)
23637.2 Da
IEP (calculated)
9.942
GRAVY (calculated)
-0.598
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVAYHLYR HVMRYNPENL RWFNRDRFYL NKRIDIKHLQ YIFKLLLKTC IEYDNYPDNY YESILRQSNH SVRHLLKNVV TTGPLGQGVA NAVGVAPAKF
101: NKPDAVLVDH RTYCIMGDGE MPWKAYPTKL HTGSSRSYTM TTTTQSMETP ISPSPKTSLQ ALKLWVGTRS RWTAYIRTSN HSETQYDVLI MRLADQHSSR
201: HGH
101: NKPDAVLVDH RTYCIMGDGE MPWKAYPTKL HTGSSRSYTM TTTTQSMETP ISPSPKTSLQ ALKLWVGTRS RWTAYIRTSN HSETQYDVLI MRLADQHSSR
201: HGH
001: MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEDLKQFRQW GSKTPGHPEN FETPGIEVTT GPLGQGIANA
201: VGLALAEKHL AARFNKPDAE VVDHYTYAIL GDGCQMEGIS NEACSLAGHW GLGKLIAFYD DNHISIDGDT EIAFTENVDQ RFEALGWHVI WVKNGNTGYD
301: EIRAAIKEAK TVTDKPTLIK VTTTIGYGSP NKANSYSVHG AALGEKEVEA TRNNLGWPYE PFQVPDDVKS HWSRHTPEGA TLESDWSAKF AAYEKKYPEE
401: ASELKSIITG ELPAGWEKAL PTYTPESPGD ATRNLSQQCL NALAKVVPGF LGGSADLASS NMTLLKAFGD FQKATPEERN LRFGVREHGM GAICNGIALH
501: SPGLIPYCAT FFVFTDYMRG AMRISALSEA GVIYVMTHDS IGLGEDGPTH QPIEHIASFR AMPNTLMFRP ADGNETAGAY KIAVTKRKTP SILALSRQKL
601: PHLPGTSIEG VEKGGYTISD DSSGNKPDVI LIGTGSELEI AAQAAEVLRK DGKTVRVVSF VCWELFDEQS DEYKESVLPS DVSARVSIEA ASTFGWGKIV
701: GGKGKSIGIN SFGASAPAPL LYKEFGITVE AVVDAAKSFF
101: SGHPGLPMGC APMAHILYDE VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEDLKQFRQW GSKTPGHPEN FETPGIEVTT GPLGQGIANA
201: VGLALAEKHL AARFNKPDAE VVDHYTYAIL GDGCQMEGIS NEACSLAGHW GLGKLIAFYD DNHISIDGDT EIAFTENVDQ RFEALGWHVI WVKNGNTGYD
301: EIRAAIKEAK TVTDKPTLIK VTTTIGYGSP NKANSYSVHG AALGEKEVEA TRNNLGWPYE PFQVPDDVKS HWSRHTPEGA TLESDWSAKF AAYEKKYPEE
401: ASELKSIITG ELPAGWEKAL PTYTPESPGD ATRNLSQQCL NALAKVVPGF LGGSADLASS NMTLLKAFGD FQKATPEERN LRFGVREHGM GAICNGIALH
501: SPGLIPYCAT FFVFTDYMRG AMRISALSEA GVIYVMTHDS IGLGEDGPTH QPIEHIASFR AMPNTLMFRP ADGNETAGAY KIAVTKRKTP SILALSRQKL
601: PHLPGTSIEG VEKGGYTISD DSSGNKPDVI LIGTGSELEI AAQAAEVLRK DGKTVRVVSF VCWELFDEQS DEYKESVLPS DVSARVSIEA ASTFGWGKIV
701: GGKGKSIGIN SFGASAPAPL LYKEFGITVE AVVDAAKSFF
Arabidopsis Description
TKL-1Transketolase-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.