Factsheet for GSMUA_Achr6P00680_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P17000_001	Banana	cytosol	90.2	91.52
Bra030366.1-P	Field mustard	cytosol	80.98	85.15
VIT_11s0016g04710.t01	Wine grape	cytosol	85.3	85.06
CDY62165	Canola	cytosol	80.69	84.85
CDY61819	Canola	cytosol	80.4	84.55
EES04724	Sorghum	cytosol	82.42	83.87
KRH03754	Soybean	cytosol	84.44	83.24
KRH56652	Soybean	cytosol, endoplasmic reticulum, nucleus	84.44	83.24
Zm00001d046445_P002	Maize	cytosol, extracellular	81.56	83.24
EER90002	Sorghum	cytosol	81.56	83.24
HORVU5Hr1G058430.1	Barley	cytosol	81.56	83.24
Os06t0598900-01	Rice	cytosol	81.84	83.04
TraesCS5B01G194400.1	Wheat	cytosol, golgi	81.27	82.94
CDY62196	Canola	cytosol	80.4	82.79
Bra018983.1-P	Field mustard	cytosol	80.4	82.79
Os02t0205400-01	Rice	cytosol	81.56	82.75
TraesCS5D01G201800.1	Wheat	cytosol	80.98	82.65
AT3G15610.1	Thale cress	cytosol	80.69	82.11
VIT_09s0002g05790.t01	Wine grape	cytosol	81.84	82.08
CDX89958	Canola	cytosol	80.4	81.82
CDY40132	Canola	cytosol	80.12	81.52
TraesCS5A01G189200.2	Wheat	cytosol	81.27	81.5
HORVU7Hr1G084630.1	Barley	cytosol	79.83	80.99
TraesCS7A01G372500.2	Wheat	cytosol	79.83	80.99
AT1G52730.1	Thale cress	cytosol	79.83	80.76
TraesCS7D01G350400.1	Wheat	cytosol	79.83	80.52
TraesCS7B01G254800.1	Wheat	cytosol	79.54	79.77
PGSC0003DMT400014299	Potato	cytosol	78.39	76.4
AT1G15470.1	Thale cress	cytosol	73.2	76.28
Solyc03g120010.2.1	Tomato	nucleus	78.1	76.12
CDY39650	Canola	cytosol	73.2	75.82
CDY55992	Canola	cytosol	72.33	74.7
CDX81717	Canola	cytosol	72.05	74.4
Bra026760.1-P	Field mustard	cytosol	71.76	74.11
Zm00001d036905_P002	Maize	cytosol	80.69	73.49
HORVU5Hr1G035620.1	Barley	cytosol	25.07	71.9
HORVU7Hr1G085770.1	Barley	cytosol	22.77	64.75
HORVU1Hr1G058470.4	Barley	cytosol, nucleus, plastid	39.48	49.1
GSMUA_Achr2P07570_001	Banana	cytosol	21.9	23.68
GSMUA_Achr11P...	Banana	cytosol	13.26	15.54

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr6G00680_001
EnsemblPlants:GSMUA_Achr6P00680_001	EnsemblPlants:GSMUA_Achr6T00680_001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M0T316
PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44239	PANTHER:PTHR44239:SF1
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000295CDFD	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:	:	:

Description

Serine-threonine kinase receptor-associated protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G00680_001]

Coordinates

chr6:-:455884..461207

Molecular Weight (calculated)

37559.0 Da

IEP (calculated)

6.297

GRAVY (calculated)

-0.331

Length

347 amino acids

Sequence
(BLAST)

001: MDKKKVAVPL VCHGHSRPVV DLFYSPVTPD GFFLISASKD ASPMLRNGET GDWIGTFEGH KGAVWSCCLD TNALRAASGS ADFSAKVWDA IIGTELHSFE
101: HKHIVRACAF SEDTHLLLTG GIEKILRTFD LNRPDAPPRE IDKSPGSIRT VAWLHSDQTI LSSCTDIGGV RLWDVRSGKI VQTLETKSPV TSAEVSQDGR
201: YITTADGSSV KFWDANHFGL VKSYNMPCTV ESASLEPKDG NKFVAGGEDM WVHVFDFHTG VEIACNKGHH GPVHCVRFSP GGESYASGSE DGTIRIWQMG
301: PTATDDNEPY GTNGPTGKAK VGVNEVSHKI EGFHITKDGP SEKSTVT

Best Arabidopsis Sequence Match ( AT3G15610.1 )
(BLAST)

001: MEKKKVATPL VCHGHSRPVV DLFYSPITPD GFFLISASKD SQPMLRNGET GDWIGTFEGH KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE
101: HKHIVRACAF SQDTKYLITG GFEKILRVFD LNRLDAPPTE IDKSPGSIRT LTWLHGDQTI LSSCTDIGGV RLWDVRSGKI VQTLETKSPV TSAEVSQDGR
201: YITTADGSTV KFWDANHFGL VKSYDMPCNI ESASLEPKSG NKFVAGGEDM WVRLFDFHTG KEIGCNKGHH GPVHCVRFAP TGESYASGSE DGTIRIWQTG
301: PVNPEEISES KPKQSVDEVA RKIEGFHINK EGKTAEKPSD A

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9LW17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.