Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74580 | Soybean | endoplasmic reticulum | 88.16 | 86.81 |
| VIT_01s0011g06630.t01 | Wine grape | cytosol | 87.23 | 85.89 |
| KRH40031 | Soybean | endoplasmic reticulum | 86.92 | 85.58 |
| KRH23773 | Soybean | endoplasmic reticulum | 86.92 | 85.58 |
| PGSC0003DMT400023872 | Potato | cytosol, mitochondrion | 83.8 | 82.52 |
| Solyc11g017070.1.1 | Tomato | nucleus | 82.55 | 81.29 |
| Os08t0308100-01 | Rice | nucleus | 82.24 | 80.98 |
| Os05t0256000-01 | Rice | nucleus, plasma membrane | 81.93 | 80.67 |
| Os11t0606300-01 | Rice | cytosol | 16.82 | 79.41 |
| TraesCS4D01G149800.1 | Wheat | plastid | 80.37 | 79.14 |
| Zm00001d018873_P001 | Maize | plasma membrane | 79.13 | 77.91 |
| Zm00001d007900_P003 | Maize | mitochondrion | 78.82 | 77.61 |
| TraesCS2B01G539500.1 | Wheat | cytosol, mitochondrion | 79.13 | 77.44 |
| EER98031 | Sorghum | mitochondrion | 77.88 | 76.69 |
| CDY34145 | Canola | cytosol, mitochondrion | 78.5 | 76.36 |
| HORVU4Hr1G040280.4 | Barley | cytosol, mitochondrion | 80.06 | 75.81 |
| TraesCS4A01G166500.1 | Wheat | nucleus | 80.06 | 75.81 |
| TraesCS2A01G511400.1 | Wheat | cytosol, mitochondrion | 76.32 | 75.38 |
| AT2G46280.2 | Thale cress | mitochondrion | 76.64 | 75.0 |
| CDY13713 | Canola | mitochondrion | 79.75 | 74.42 |
| Bra025277.1-P | Field mustard | mitochondrion | 79.75 | 74.42 |
| CDY71621 | Canola | mitochondrion | 79.13 | 73.84 |
| TraesCS4B01G164300.1 | Wheat | golgi | 74.45 | 72.42 |
| AT2G46290.1 | Thale cress | cytosol | 75.39 | 68.17 |
| GSMUA_Achr11P... | Banana | cytosol | 62.31 | 67.57 |
| Bra033012.1-P | Field mustard | cytosol | 78.5 | 39.56 |
| CDY03970 | Canola | cytosol | 78.5 | 37.06 |
| GSMUA_Achr2P17000_001 | Banana | cytosol | 24.92 | 23.39 |
| GSMUA_Achr6P00680_001 | Banana | cytosol | 23.68 | 21.9 |
Protein Annotations
| MapMan:17.4.1.3.9 | Gene3D:2.130.10.10 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0001731 | GO:GO:0001732 | GO:GO:0002183 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0006446 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016282 | GO:GO:0019538 | GO:GO:0033290 | EnsemblPlantsGene:GSMUA_Achr2G07570_001 |
| EnsemblPlants:GSMUA_Achr2P07570_001 | EnsemblPlants:GSMUA_Achr2T07570_001 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M0S5Z8 |
| HAMAP:MF_03008 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR19877 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0002955690 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | InterPro:eIF3i | : | : |
Description
Eukaryotic translation initiation factor 3 subunit I [Source:GMGC_GENE;Acc:GSMUA_Achr2G07570_001]
Coordinates
chr2:+:11943810..11949365
Molecular Weight (calculated)
35416.8 Da
IEP (calculated)
7.686
GRAVY (calculated)
-0.397
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGHERPLTF LKYNREGDLL FSCAKDHNPT VWFADNGERL GTYRGHNGAV WCCDVSRDSM RLITGSADQS VKLWNVQTGA QLYSFNFDSP ARSVDFSVGD
101: KLAVITTDPF MGLPSTIQVK RIARDPNEQS SESVLTIKGP QGRINRAIWG PLNKTIISAG EDAVVRVWDT ETGQLLKESD KETGHQKTVT SLSKSADGSH
201: FLTGSLDKSA KLWDARTLTL IKTYVTERPV NACAISPLLD HVVIGGGQEA VHVTTTDRRA GKFEAKFFHK ILQEEIGGVK GHFGPINALA FNPDGRSFSS
301: GGEDGYVRLH HFDPDYFTIK M
101: KLAVITTDPF MGLPSTIQVK RIARDPNEQS SESVLTIKGP QGRINRAIWG PLNKTIISAG EDAVVRVWDT ETGQLLKESD KETGHQKTVT SLSKSADGSH
201: FLTGSLDKSA KLWDARTLTL IKTYVTERPV NACAISPLLD HVVIGGGQEA VHVTTTDRRA GKFEAKFFHK ILQEEIGGVK GHFGPINALA FNPDGRSFSS
301: GGEDGYVRLH HFDPDYFTIK M
001: MTIECVNPEG LRFNQMKSSS HQTLETRMRP ILMKGHERPL TFLRYNRNGD LLFSCAKDHT PTVWFADNGE RLGTYRGHSG AVWCCDISRD SSRLITGSAD
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
Arabidopsis Description
Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A178VR74]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.