CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007900_P003	Maize	mitochondrion	98.16	98.16
Zm00001d018873_P001	Maize	plasma membrane	97.55	97.55
Os08t0308100-01	Rice	nucleus	90.18	90.18
Os05t0256000-01	Rice	nucleus, plasma membrane	88.96	88.96
TraesCS4D01G149800.1	Wheat	plastid	88.65	88.65
TraesCS2B01G539500.1	Wheat	cytosol, mitochondrion	88.04	87.5
TraesCS4A01G166500.1	Wheat	nucleus	89.26	85.84
HORVU4Hr1G040280.4	Barley	cytosol, mitochondrion	88.96	85.55
TraesCS2A01G511400.1	Wheat	cytosol, mitochondrion	84.36	84.62
TraesCS4B01G164300.1	Wheat	golgi	84.05	83.03
KRH74580	Soybean	endoplasmic reticulum	80.37	80.37
VIT_01s0011g06630.t01	Wine grape	cytosol	80.06	80.06
KRH40031	Soybean	endoplasmic reticulum	78.22	78.22
KRH23773	Soybean	endoplasmic reticulum	78.22	78.22
GSMUA_Achr2P07570_001	Banana	cytosol	76.69	77.88
PGSC0003DMT400023872	Potato	cytosol, mitochondrion	77.3	77.3
Solyc11g017070.1.1	Tomato	nucleus	75.77	75.77
AT2G46280.2	Thale cress	mitochondrion	76.07	75.61
CDY34145	Canola	cytosol, mitochondrion	76.38	75.45
CDY71621	Canola	mitochondrion	76.38	72.38
CDY13713	Canola	mitochondrion	76.38	72.38
Bra025277.1-P	Field mustard	mitochondrion	76.38	72.38
AT2G46290.1	Thale cress	cytosol	75.15	69.01
GSMUA_Achr11P...	Banana	cytosol	50.61	55.74
Bra033012.1-P	Field mustard	cytosol	76.38	39.09
CDY03970	Canola	cytosol	76.38	36.62
EER90002	Sorghum	cytosol	23.31	22.35
EES04724	Sorghum	cytosol	22.39	21.41

Protein Annotations

MapMan:17.4.1.3.9	Gene3D:2.130.10.10	EntrezGene:8081165	UniProt:C5XAA7	EnsemblPlants:EER98031	ProteinID:EER98031
ProteinID:EER98031.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0001731	GO:GO:0001732	GO:GO:0002183	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005852	GO:GO:0006412	GO:GO:0006413
GO:GO:0006446	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016282	GO:GO:0019538	GO:GO:0033290	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	HAMAP:MF_03008	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR19877	SMART:SM00320	EnsemblPlantsGene:SORBI_3002G044000	SUPFAM:SSF50978	UniParc:UPI0001A841CB
InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_002461510.1
InterPro:eIF3i	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:4174779..4178089

Molecular Weight (calculated)

36270.7 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.407

Length

326 amino acids

Sequence
(BLAST)

001: MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPTVWYAD NGDRLGTYRG HNGAVWTCDV SRDSARLITG SADQTAKLWE VSTGKELFSF RFDAPARSVE
101: FAIGDALAVV TTDNFMDHVP TVQVKHIAED IDDQTEDSAL VITGIKGRIN RAVWGPLNRT IITAGEDATI RIWDSETGKL LKESDKESGH QKTITSLSKS
201: LDWSHFVTGS LDKSAKLWDT RTLTLIKTYV TERPVNAVDI SPTHDTVVLG GGQDAMNVTM TDRRAGKFEA KFYHKILQEE IGGVKGHFGP INALAFNPDG
301: RSFSSGGEDG YVRLHHFDSE YFSIKM

Best Arabidopsis Sequence Match ( AT2G46290.1 )
(BLAST)

001: MTIECVNPEG LRFNQMKSSS HQTLETRMRP ILMKGHERPL TFLRYNRNGD LLFSCAKDHT PTVWFADNGE RLGTYRGHSG AVWCCDISRD SSRLITGSAD
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI

Arabidopsis Description

Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A178VR74]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.