Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13713 | Canola | mitochondrion | 96.22 | 96.22 |
| CDY34145 | Canola | cytosol, mitochondrion | 88.37 | 92.12 |
| AT2G46280.2 | Thale cress | mitochondrion | 82.85 | 86.89 |
| PGSC0003DMT400023872 | Potato | cytosol, mitochondrion | 80.23 | 84.66 |
| KRH74580 | Soybean | endoplasmic reticulum | 79.65 | 84.05 |
| KRH23773 | Soybean | endoplasmic reticulum | 79.07 | 83.44 |
| KRH40031 | Soybean | endoplasmic reticulum | 78.49 | 82.82 |
| Solyc11g017070.1.1 | Tomato | nucleus | 78.2 | 82.52 |
| VIT_01s0011g06630.t01 | Wine grape | cytosol | 77.91 | 82.21 |
| AT2G46290.1 | Thale cress | cytosol | 81.69 | 79.15 |
| GSMUA_Achr2P07570_001 | Banana | cytosol | 73.84 | 79.13 |
| Os08t0308100-01 | Rice | nucleus | 74.13 | 78.22 |
| Os05t0256000-01 | Rice | nucleus, plasma membrane | 72.97 | 76.99 |
| TraesCS4D01G149800.1 | Wheat | plastid | 72.67 | 76.69 |
| Zm00001d018873_P001 | Maize | plasma membrane | 72.38 | 76.38 |
| EER98031 | Sorghum | mitochondrion | 72.38 | 76.38 |
| Zm00001d007900_P003 | Maize | mitochondrion | 72.09 | 76.07 |
| TraesCS2B01G539500.1 | Wheat | cytosol, mitochondrion | 71.8 | 75.3 |
| Os11t0606300-01 | Rice | cytosol | 14.83 | 75.0 |
| HORVU4Hr1G040280.4 | Barley | cytosol, mitochondrion | 72.97 | 74.04 |
| TraesCS4A01G166500.1 | Wheat | nucleus | 72.97 | 74.04 |
| TraesCS2A01G511400.1 | Wheat | cytosol, mitochondrion | 68.6 | 72.62 |
| TraesCS4B01G164300.1 | Wheat | golgi | 68.02 | 70.91 |
| GSMUA_Achr11P... | Banana | cytosol | 49.13 | 57.09 |
| CDY03970 | Canola | cytosol | 88.37 | 44.71 |
| CDY62165 | Canola | cytosol | 23.55 | 24.55 |
| CDY61819 | Canola | cytosol | 23.26 | 24.24 |
| CDY62196 | Canola | cytosol | 23.26 | 23.74 |
| CDY39650 | Canola | cytosol | 22.97 | 23.58 |
| CDY55992 | Canola | cytosol | 22.97 | 23.51 |
| CDY40132 | Canola | cytosol | 23.26 | 23.46 |
| CDX89958 | Canola | cytosol | 23.26 | 23.46 |
| CDX81717 | Canola | cytosol | 22.67 | 23.21 |
Protein Annotations
| MapMan:17.4.1.3.9 | Gene3D:2.130.10.10 | GO:A0A078K1H4 | UniProt:A0A078K1H4 | EnsemblPlants:CDY71621 | ProteinID:CDY71621 |
| ProteinID:CDY71621.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0001731 | GO:GO:0001732 | GO:GO:0002183 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0006446 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016282 | GO:GO:0019538 | GO:GO:0033290 | EnsemblPlantsGene:GSBRNA2T00017624001 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | HAMAP:MF_03008 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19877 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0004EDE040 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | InterPro:eIF3i |
Description
BnaAnng38210DEukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A078K1H4]
Coordinates
chrLK046673:+:313..2414
Molecular Weight (calculated)
38087.0 Da
IEP (calculated)
6.790
GRAVY (calculated)
-0.361
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPILMKGHE RPLTFLRYNR DGDMLFSCAK DHIPTLWYAD NGERHGTYRG HNGAVWCCDV SRDSSRLITG SADQTAKLWD VKTETQLFSF KFSSPARSVD
101: FSVGDKLAVI TTDPFMERTS AIHVKRIAED PQDQDGDSVL VLENPEGRKR INRAVWGPLN QTIVSGGEDA VLRIWDAETG KLLKETDKEV GHKQTITSLC
201: KSADDSHFLT GSLDKTAKAC LPRLSSLSIA CFKVLWDMRT LTLIKTYTSG VPVNAVSMSP LLDHVVIGGG QDASAVTTTD HRAGNFEAKF YDKILQEEIG
301: GVKGHFGPIN ALAFNPDGRS FSSGGEDGYV RLHHFDSDYF NIKI
101: FSVGDKLAVI TTDPFMERTS AIHVKRIAED PQDQDGDSVL VLENPEGRKR INRAVWGPLN QTIVSGGEDA VLRIWDAETG KLLKETDKEV GHKQTITSLC
201: KSADDSHFLT GSLDKTAKAC LPRLSSLSIA CFKVLWDMRT LTLIKTYTSG VPVNAVSMSP LLDHVVIGGG QDASAVTTTD HRAGNFEAKF YDKILQEEIG
301: GVKGHFGPIN ALAFNPDGRS FSSGGEDGYV RLHHFDSDYF NIKI
001: MTIECVNPEG LRFNQMKSSS HQTLETRMRP ILMKGHERPL TFLRYNRNGD LLFSCAKDHT PTVWFADNGE RLGTYRGHSG AVWCCDISRD SSRLITGSAD
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
Arabidopsis Description
Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A178VR74]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.