Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G46280.2 | Thale cress | mitochondrion | 83.94 | 90.85 |
| CDY34145 | Canola | cytosol, mitochondrion | 78.59 | 84.55 |
| PGSC0003DMT400023872 | Potato | cytosol, mitochondrion | 76.34 | 83.13 |
| Bra025277.1-P | Field mustard | mitochondrion | 79.15 | 81.69 |
| CDY13713 | Canola | mitochondrion | 79.15 | 81.69 |
| CDY71621 | Canola | mitochondrion | 79.15 | 81.69 |
| KRH74580 | Soybean | endoplasmic reticulum | 74.93 | 81.6 |
| Solyc11g017070.1.1 | Tomato | nucleus | 74.65 | 81.29 |
| KRH40031 | Soybean | endoplasmic reticulum | 74.08 | 80.67 |
| KRH23773 | Soybean | endoplasmic reticulum | 74.08 | 80.67 |
| VIT_01s0011g06630.t01 | Wine grape | cytosol | 73.52 | 80.06 |
| Os08t0308100-01 | Rice | nucleus | 70.42 | 76.69 |
| TraesCS4D01G149800.1 | Wheat | plastid | 70.14 | 76.38 |
| Os05t0256000-01 | Rice | nucleus, plasma membrane | 69.86 | 76.07 |
| GSMUA_Achr2P07570_001 | Banana | cytosol | 68.17 | 75.39 |
| EER98031 | Sorghum | mitochondrion | 69.01 | 75.15 |
| TraesCS2B01G539500.1 | Wheat | cytosol, mitochondrion | 69.3 | 75.0 |
| Zm00001d007900_P003 | Maize | mitochondrion | 68.45 | 74.54 |
| Zm00001d018873_P001 | Maize | plasma membrane | 68.45 | 74.54 |
| HORVU4Hr1G040280.4 | Barley | cytosol, mitochondrion | 70.42 | 73.75 |
| TraesCS4A01G166500.1 | Wheat | nucleus | 70.42 | 73.75 |
| TraesCS2A01G511400.1 | Wheat | cytosol, mitochondrion | 67.32 | 73.54 |
| TraesCS4B01G164300.1 | Wheat | golgi | 65.63 | 70.61 |
| Os11t0606300-01 | Rice | cytosol | 13.52 | 70.59 |
| GSMUA_Achr11P... | Banana | cytosol | 45.07 | 54.05 |
| Bra033012.1-P | Field mustard | cytosol | 78.59 | 43.8 |
| CDY03970 | Canola | cytosol | 78.59 | 41.03 |
| AT3G15610.1 | Thale cress | cytosol | 21.13 | 21.99 |
| AT1G15470.1 | Thale cress | cytosol | 20.56 | 21.92 |
| AT1G52730.1 | Thale cress | cytosol | 21.13 | 21.87 |
Protein Annotations
| MapMan:17.4.1.3.9 | Gene3D:2.130.10.10 | EntrezGene:819237 | UniProt:A0A178VR74 | ProteinID:AEC10672.1 | ArrayExpress:AT2G46290 |
| EnsemblPlantsGene:AT2G46290 | RefSeq:AT2G46290 | TAIR:AT2G46290 | RefSeq:AT2G46290-TAIR-G | EnsemblPlants:AT2G46290.1 | TAIR:AT2G46290.1 |
| Unigene:At.36529 | UniProt:F4II66 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0001731 | GO:GO:0001732 | GO:GO:0002183 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0006446 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016282 | GO:GO:0019538 | GO:GO:0033290 |
| GO:GO:0080008 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | HAMAP:MF_03008 | RefSeq:NP_182152.2 |
| ProteinID:OAP08326.1 | PFAM:PF00400 | PO:PO:0000293 | PO:PO:0009005 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19877 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0000196EF1 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | InterPro:eIF3i |
Description
Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A178VR74]
Coordinates
chr2:-:19005771..19007952
Molecular Weight (calculated)
38998.0 Da
IEP (calculated)
6.924
GRAVY (calculated)
-0.343
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIECVNPEG LRFNQMKSSS HQTLETRMRP ILMKGHERPL TFLRYNRNGD LLFSCAKDHT PTVWFADNGE RLGTYRGHSG AVWCCDISRD SSRLITGSAD
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.