Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G149800.1 | Wheat | plastid | 95.87 | 99.69 |
| TraesCS4A01G166500.1 | Wheat | nucleus | 98.53 | 98.53 |
| TraesCS4B01G164300.1 | Wheat | golgi | 89.97 | 92.42 |
| Os08t0308100-01 | Rice | nucleus | 86.43 | 89.88 |
| Os05t0256000-01 | Rice | nucleus, plasma membrane | 86.14 | 89.57 |
| Zm00001d018873_P001 | Maize | plasma membrane | 85.84 | 89.26 |
| Zm00001d007900_P003 | Maize | mitochondrion | 85.84 | 89.26 |
| EER98031 | Sorghum | mitochondrion | 85.55 | 88.96 |
| KRH74580 | Soybean | endoplasmic reticulum | 77.88 | 80.98 |
| VIT_01s0011g06630.t01 | Wine grape | cytosol | 77.29 | 80.37 |
| GSMUA_Achr2P07570_001 | Banana | cytosol | 75.81 | 80.06 |
| KRH40031 | Soybean | endoplasmic reticulum | 76.99 | 80.06 |
| KRH23773 | Soybean | endoplasmic reticulum | 76.7 | 79.75 |
| PGSC0003DMT400023872 | Potato | cytosol, mitochondrion | 76.11 | 79.14 |
| Solyc11g017070.1.1 | Tomato | nucleus | 74.34 | 77.3 |
| AT2G46280.2 | Thale cress | mitochondrion | 74.04 | 76.52 |
| CDY34145 | Canola | cytosol, mitochondrion | 73.45 | 75.45 |
| CDY13713 | Canola | mitochondrion | 74.63 | 73.55 |
| Bra025277.1-P | Field mustard | mitochondrion | 74.63 | 73.55 |
| CDY71621 | Canola | mitochondrion | 74.04 | 72.97 |
| AT2G46290.1 | Thale cress | cytosol | 73.75 | 70.42 |
| GSMUA_Achr11P... | Banana | cytosol | 49.26 | 56.42 |
| Bra033012.1-P | Field mustard | cytosol | 73.45 | 39.09 |
| CDY03970 | Canola | cytosol | 73.45 | 36.62 |
| HORVU5Hr1G035620.1 | Barley | cytosol | 8.85 | 24.79 |
| HORVU5Hr1G058430.1 | Barley | cytosol | 22.71 | 22.65 |
| HORVU7Hr1G084630.1 | Barley | cytosol | 22.12 | 21.93 |
| HORVU7Hr1G085770.1 | Barley | cytosol | 7.37 | 20.49 |
| HORVU1Hr1G058470.4 | Barley | cytosol, nucleus, plastid | 11.21 | 13.62 |
Protein Annotations
| MapMan:17.4.1.3.9 | Gene3D:2.130.10.10 | UniProt:A0A287NVB1 | EMBL:AK354166 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0001731 |
| GO:GO:0001732 | GO:GO:0002183 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005852 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016282 | GO:GO:0019538 | GO:GO:0033290 |
| EnsemblPlantsGene:HORVU4Hr1G040280 | EnsemblPlants:HORVU4Hr1G040280.4 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | HAMAP:MF_03008 |
| PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19877 |
| SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000B466CDF | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | InterPro:eIF3i | SEG:seg | : | : |
Description
Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A287NVB1]
Coordinates
chrchr4H:-:309109269..309113323
Molecular Weight (calculated)
37787.9 Da
IEP (calculated)
7.826
GRAVY (calculated)
-0.410
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPILMKGHE RPLTFLKYNR DGDLLFSCAK DHTPTVWYAD NGDRLGTYRG HNGAVWSCDV SRHSTRLITG SADQTAKLWD VKTGKELFTF RFDAPARSVD
101: LAIGDHLAVI TTDSFMGNMP TAQVKRIAED LQDQTEESAL VISGITGRIN RAVWGPGNRT IITAGEDATI RIWDSETGKL LKESDKEVGH QKAISSLSKS
201: LDWSHFLTGS LDKSAKLWDA RTLTLIKTYV TERPVNAVDI SPTLDHVVIG GGQDAMNVTM TDRRAGKFEA KFFHKILEEE IGGVKGHFGP INALAFNPDG
301: RSFSSGGEDG YVRLHHFDPE YFNIKMLLLR RPPRTLERT
101: LAIGDHLAVI TTDSFMGNMP TAQVKRIAED LQDQTEESAL VISGITGRIN RAVWGPGNRT IITAGEDATI RIWDSETGKL LKESDKEVGH QKAISSLSKS
201: LDWSHFLTGS LDKSAKLWDA RTLTLIKTYV TERPVNAVDI SPTLDHVVIG GGQDAMNVTM TDRRAGKFEA KFFHKILEEE IGGVKGHFGP INALAFNPDG
301: RSFSSGGEDG YVRLHHFDPE YFNIKMLLLR RPPRTLERT
001: MTIECVNPEG LRFNQMKSSS HQTLETRMRP ILMKGHERPL TFLRYNRNGD LLFSCAKDHT PTVWFADNGE RLGTYRGHSG AVWCCDISRD SSRLITGSAD
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
Arabidopsis Description
Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A178VR74]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.