Factsheet for HORVU7Hr1G085770.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G035620.1	Barley	cytosol	68.85	69.42
HORVU7Hr1G084630.1	Barley	cytosol	71.31	25.44
HORVU5Hr1G058430.1	Barley	cytosol	68.85	24.71
Os06t0598900-01	Rice	cytosol	68.85	24.56
Bra030366.1-P	Field mustard	cytosol	65.57	24.24
CDY62165	Canola	cytosol	65.57	24.24
Zm00001d046445_P002	Maize	cytosol, extracellular	67.21	24.12
EER90002	Sorghum	cytosol	67.21	24.12
CDY61819	Canola	cytosol	64.75	23.94
Bra018983.1-P	Field mustard	cytosol	64.75	23.44
CDY62196	Canola	cytosol	64.75	23.44
HORVU1Hr1G058470.4	Barley	cytosol, nucleus, plastid	53.28	23.3
AT1G52730.1	Thale cress	cytosol	64.75	23.03
CDX89958	Canola	cytosol	63.93	22.87
GSMUA_Achr6P00680_001	Banana	cytosol	64.75	22.77
Solyc06g052000.1.1	Tomato	cytosol	32.79	22.73
CDY40132	Canola	cytosol	63.11	22.58
AT3G15610.1	Thale cress	cytosol	63.11	22.58
GSMUA_Achr2P17000_001	Banana	cytosol	63.11	22.51
CDY39650	Canola	cytosol	59.84	21.79
CDY55992	Canola	cytosol	59.84	21.73
CDX81717	Canola	cytosol	59.84	21.73
AT1G15470.1	Thale cress	cytosol	59.02	21.62
VIT_11s0016g04710.t01	Wine grape	cytosol	61.48	21.55
Bra026760.1-P	Field mustard	cytosol	59.02	21.43
VIT_09s0002g05790.t01	Wine grape	cytosol	60.66	21.39
PGSC0003DMT400014299	Potato	cytosol	62.3	21.35
KRH03754	Soybean	cytosol	61.48	21.31
Zm00001d036905_P002	Maize	cytosol	66.39	21.26
KRH56652	Soybean	cytosol, endoplasmic reticulum, nucleus	60.66	21.02
HORVU4Hr1G040280.4	Barley	cytosol, mitochondrion	20.49	7.37

Protein Annotations

EnsemblPlants:HORVU7Hr1G085770.1	EnsemblPlantsGene:HORVU7Hr1G085770	Gene3D:2.130.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom_sf	PANTHER:PTHR44239
PANTHER:PTHR44239:SF1	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000B47C092	UniProt:A0A287X654	MapMan:35.2

Description

No Description!

Coordinates

chrchr7H:+:518782338..518784153

Molecular Weight (calculated)

13779.5 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.183

Length

122 amino acids

Sequence
(BLAST)

001: MGGVRFVWKM RSGKIVQTLE TKAPVTSVEV SQDGRFITTA DGSSVKFWDA NHFGLVKSYD MSCTMESASL EPKSGSKIIA GGEDMWVHVH DFFTDEEIVM
101: RSQNKSSIVY HMVFFQDGIM KW

Best Arabidopsis Sequence Match ( AT1G52730.1 )
(BLAST)

001: MEKKKVTIPQ VCHGHSRPVV DLFYSPITPD GFFLISASKD SHPMLRNGET GDWIGTFEGH KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE
101: HKHIVRACAF SEDTKSLLTG GFEKILRVFD MNRLDAPPTE VDKSPGSIRT LTWLHSDQTI LSSCTDIGGV RLWDVRSGKI VQTLETKSPV TSAEVSQDGR
201: YITTADGSTV KFWDANHFGL VKSYDMPCNI ESASLEPKSG EKFVAGGEDM WVRVFDFYTG EEIGCNKGHH GPVHCVRFTP TGLSYASGSE DGTIRIWQTT
301: PANPEENETS SRRVKHSVDE VSKKIEGFHI NKEGKTAEKP SDT

Arabidopsis Description

AT1G52730 protein [Source:UniProtKB/TrEMBL;Acc:Q9SSS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.