Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56652 | Soybean | cytosol, endoplasmic reticulum, nucleus | 98.3 | 98.3 |
| VIT_11s0016g04710.t01 | Wine grape | cytosol | 84.94 | 85.92 |
| GSMUA_Achr2P17000_001 | Banana | cytosol | 82.39 | 84.8 |
| GSMUA_Achr6P00680_001 | Banana | cytosol | 83.24 | 84.44 |
| Bra030366.1-P | Field mustard | cytosol | 78.12 | 83.33 |
| CDY61819 | Canola | cytosol | 78.12 | 83.33 |
| CDY62165 | Canola | cytosol | 77.84 | 83.03 |
| Bra018983.1-P | Field mustard | cytosol | 79.26 | 82.79 |
| CDY62196 | Canola | cytosol | 79.26 | 82.79 |
| AT3G15610.1 | Thale cress | cytosol | 79.55 | 82.11 |
| EER90002 | Sorghum | cytosol | 79.26 | 82.06 |
| AT1G52730.1 | Thale cress | cytosol | 79.83 | 81.92 |
| CDX89958 | Canola | cytosol | 79.26 | 81.82 |
| Zm00001d046445_P002 | Maize | cytosol, extracellular | 78.98 | 81.76 |
| CDY40132 | Canola | cytosol | 78.98 | 81.52 |
| VIT_09s0002g05790.t01 | Wine grape | cytosol | 80.11 | 81.5 |
| TraesCS5B01G194400.1 | Wheat | cytosol, golgi | 78.69 | 81.47 |
| Os06t0598900-01 | Rice | cytosol | 78.98 | 81.29 |
| TraesCS5D01G201800.1 | Wheat | cytosol | 78.41 | 81.18 |
| Os02t0205400-01 | Rice | cytosol | 78.69 | 80.99 |
| HORVU5Hr1G058430.1 | Barley | cytosol | 77.84 | 80.59 |
| HORVU7Hr1G084630.1 | Barley | cytosol | 77.84 | 80.12 |
| TraesCS5A01G189200.2 | Wheat | cytosol | 78.69 | 80.06 |
| TraesCS7A01G372500.2 | Wheat | cytosol | 77.56 | 79.82 |
| TraesCS7D01G350400.1 | Wheat | cytosol | 77.84 | 79.65 |
| EES04724 | Sorghum | cytosol | 76.99 | 79.47 |
| TraesCS7B01G254800.1 | Wheat | cytosol | 77.56 | 78.9 |
| CDY39650 | Canola | cytosol | 72.16 | 75.82 |
| AT1G15470.1 | Thale cress | cytosol | 71.02 | 75.08 |
| PGSC0003DMT400014299 | Potato | cytosol | 75.57 | 74.72 |
| Solyc03g120010.2.1 | Tomato | nucleus | 75.0 | 74.16 |
| CDY55992 | Canola | cytosol | 70.74 | 74.11 |
| CDX81717 | Canola | cytosol | 70.45 | 73.81 |
| Bra026760.1-P | Field mustard | cytosol | 70.17 | 73.51 |
| Zm00001d036905_P002 | Maize | cytosol | 78.41 | 72.44 |
| HORVU5Hr1G035620.1 | Barley | cytosol | 23.58 | 68.59 |
| HORVU7Hr1G085770.1 | Barley | cytosol | 21.31 | 61.48 |
| Solyc06g052000.1.1 | Tomato | cytosol | 27.56 | 55.11 |
| HORVU1Hr1G058470.4 | Barley | cytosol, nucleus, plastid | 39.77 | 50.18 |
| KRH40031 | Soybean | endoplasmic reticulum | 23.01 | 24.85 |
| KRH23773 | Soybean | endoplasmic reticulum | 22.73 | 24.54 |
| KRH74580 | Soybean | endoplasmic reticulum | 22.44 | 24.23 |
Protein Annotations
| EntrezGene:100782712 | Gene3D:2.130.10.10 | MapMan:35.1 | EMBL:ACUP02010360 | EnsemblPlantsGene:GLYMA_17G118600 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | UniProt:I1MUD6 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| EnsemblPlants:KRH03754 | ProteinID:KRH03754 | ProteinID:KRH03754.1 | PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR44239 | PANTHER:PTHR44239:SF1 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000233E392 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : |
Description
hypothetical protein
Coordinates
chr17:+:9384137..9388911
Molecular Weight (calculated)
38317.6 Da
IEP (calculated)
5.252
GRAVY (calculated)
-0.367
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKKVAVPL VCHGHSRPVV DLFYSPVTPD GFFLISASKD SSPMLRNGET GDWIGTFEGH KGAVWSCCLD TSALRAATAS ADFSTKVWDA LTGDELHSFE
101: HKHIARACAF SEDTHLLLTG GVEKILRIYD MNRPDAPPRE VDKSPGSVRT VAWLHSDQTI LSSCTDMGGV RLWDVRSGKI VQTLETKSSV TSAEVSQDGR
201: YITTADGSTV KFWDANYYGL VKSYDMPCTI ESVSLEPKYG NKFVAGGEDM WVHVFDFHTG NEIACNKGHH GPVHCVRFSP GGESYASGSE DGTIRIWQTG
301: PLTLDGSETV SANGSVDKVK VTADEVSHKI EGFQIADEGK SKEKDEAVEE SS
101: HKHIARACAF SEDTHLLLTG GVEKILRIYD MNRPDAPPRE VDKSPGSVRT VAWLHSDQTI LSSCTDMGGV RLWDVRSGKI VQTLETKSSV TSAEVSQDGR
201: YITTADGSTV KFWDANYYGL VKSYDMPCTI ESVSLEPKYG NKFVAGGEDM WVHVFDFHTG NEIACNKGHH GPVHCVRFSP GGESYASGSE DGTIRIWQTG
301: PLTLDGSETV SANGSVDKVK VTADEVSHKI EGFQIADEGK SKEKDEAVEE SS
001: MEKKKVATPL VCHGHSRPVV DLFYSPITPD GFFLISASKD SQPMLRNGET GDWIGTFEGH KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE
101: HKHIVRACAF SQDTKYLITG GFEKILRVFD LNRLDAPPTE IDKSPGSIRT LTWLHGDQTI LSSCTDIGGV RLWDVRSGKI VQTLETKSPV TSAEVSQDGR
201: YITTADGSTV KFWDANHFGL VKSYDMPCNI ESASLEPKSG NKFVAGGEDM WVRLFDFHTG KEIGCNKGHH GPVHCVRFAP TGESYASGSE DGTIRIWQTG
301: PVNPEEISES KPKQSVDEVA RKIEGFHINK EGKTAEKPSD A
101: HKHIVRACAF SQDTKYLITG GFEKILRVFD LNRLDAPPTE IDKSPGSIRT LTWLHGDQTI LSSCTDIGGV RLWDVRSGKI VQTLETKSPV TSAEVSQDGR
201: YITTADGSTV KFWDANHFGL VKSYDMPCNI ESASLEPKSG NKFVAGGEDM WVRLFDFHTG KEIGCNKGHH GPVHCVRFAP TGESYASGSE DGTIRIWQTG
301: PVNPEEISES KPKQSVDEVA RKIEGFHINK EGKTAEKPSD A
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9LW17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.