Factsheet for HORVU5Hr1G035620.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G085770.1	Barley	cytosol	69.42	68.85
HORVU7Hr1G084630.1	Barley	cytosol	82.64	29.24
Os06t0598900-01	Rice	cytosol	78.51	27.78
Zm00001d046445_P002	Maize	cytosol, extracellular	76.03	27.06
HORVU5Hr1G058430.1	Barley	cytosol	76.03	27.06
EER90002	Sorghum	cytosol	76.03	27.06
Bra030366.1-P	Field mustard	cytosol	72.73	26.67
CDY62165	Canola	cytosol	72.73	26.67
Solyc06g052000.1.1	Tomato	cytosol	38.02	26.14
CDY61819	Canola	cytosol	71.07	26.06
Bra018983.1-P	Field mustard	cytosol	71.07	25.52
CDY62196	Canola	cytosol	71.07	25.52
GSMUA_Achr2P17000_001	Banana	cytosol	71.07	25.15
AT1G52730.1	Thale cress	cytosol	71.07	25.07
GSMUA_Achr6P00680_001	Banana	cytosol	71.9	25.07
CDX89958	Canola	cytosol	70.25	24.93
CDY40132	Canola	cytosol	69.42	24.63
AT3G15610.1	Thale cress	cytosol	69.42	24.63
HORVU1Hr1G058470.4	Barley	cytosol, nucleus, plastid	56.2	24.37
Zm00001d036905_P002	Maize	cytosol	75.21	23.88
VIT_11s0016g04710.t01	Wine grape	cytosol	68.59	23.85
KRH03754	Soybean	cytosol	68.59	23.58
KRH56652	Soybean	cytosol, endoplasmic reticulum, nucleus	68.59	23.58
CDX81717	Canola	cytosol	65.29	23.51
CDY55992	Canola	cytosol	65.29	23.51
AT1G15470.1	Thale cress	cytosol	64.46	23.42
CDY39650	Canola	cytosol	64.46	23.28
Bra026760.1-P	Field mustard	cytosol	64.46	23.21
VIT_09s0002g05790.t01	Wine grape	cytosol	66.12	23.12
PGSC0003DMT400014299	Potato	cytosol	67.77	23.03
HORVU4Hr1G040280.4	Barley	cytosol, mitochondrion	24.79	8.85

Protein Annotations

EnsemblPlants:HORVU5Hr1G035620.1	EnsemblPlantsGene:HORVU5Hr1G035620	Gene3D:2.130.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom_sf	PANTHER:PTHR44239
PANTHER:PTHR44239:SF1	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000B480DED	UniProt:A0A287QUW8	MapMan:35.2

Description

No Description!

Coordinates

chrchr5H:+:248574030..248575863

Molecular Weight (calculated)

13731.3 Da

IEP (calculated)

5.646

GRAVY (calculated)

-0.195

Length

121 amino acids

Sequence
(BLAST)

001: MGGVRLWDVR SGKIVQTLET KAPVTSAEVS EDGRFITTAD GSSVKFWDAN HFWLVKSYDM SCTVESASLE PKSGSKFITG GEDMWVHVYD FFTGEEIVMR
101: SQNKSSIVYH MVFFRDGIMK W

Best Arabidopsis Sequence Match ( AT1G15470.1 )
(BLAST)

001: MGAPLVCHGH SRPVVDVAYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW SCSLDKNAIR AASASADFTA KIWNALTGDE LHSFEHKHIV
101: RACAFSEDTH RLLTGGMEKI LRIFDLNRPD APPKEVGNSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVHTLE TKSPVTSAEV SQDGRYITTA
201: DGSSVKFWDA KNFGLLKSYD MPCNVESASL EPKHGNTFIA GGEDMWVHRF DFQTGEEIGC NKGHHGPVHC VRYAPGGESY TSGSEDGTVR IWVVGSVNHP
301: EESNLSGHVK LVAEEVVRKA ESLRISEKAA EAK

Arabidopsis Description

F9L1.42 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.