Factsheet for HORVU1Hr1G058470.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G035620.1	Barley	cytosol	24.37	56.2
HORVU7Hr1G085770.1	Barley	cytosol	23.3	53.28
HORVU7Hr1G084630.1	Barley	cytosol	57.35	46.78
Os06t0598900-01	Rice	cytosol	53.76	43.86
Zm00001d046445_P002	Maize	cytosol, extracellular	51.97	42.65
EER90002	Sorghum	cytosol	51.61	42.35
HORVU5Hr1G058430.1	Barley	cytosol	50.9	41.76
Bra030366.1-P	Field mustard	cytosol	48.39	40.91
GSMUA_Achr2P17000_001	Banana	cytosol	49.82	40.64
CDY62165	Canola	cytosol	48.03	40.61
VIT_11s0016g04710.t01	Wine grape	cytosol	50.54	40.52
KRH56652	Soybean	cytosol, endoplasmic reticulum, nucleus	50.9	40.34
CDY61819	Canola	cytosol	47.67	40.3
KRH03754	Soybean	cytosol	50.18	39.77
GSMUA_Achr6P00680_001	Banana	cytosol	49.1	39.48
CDY62196	Canola	cytosol	47.67	39.47
Bra018983.1-P	Field mustard	cytosol	47.67	39.47
AT1G52730.1	Thale cress	cytosol	48.03	39.07
CDX89958	Canola	cytosol	47.67	39.0
AT1G15470.1	Thale cress	cytosol	46.24	38.74
CDY40132	Canola	cytosol	47.31	38.71
CDY55992	Canola	cytosol	46.59	38.69
CDX81717	Canola	cytosol	46.59	38.69
VIT_09s0002g05790.t01	Wine grape	cytosol	47.67	38.44
AT3G15610.1	Thale cress	cytosol	46.95	38.42
CDY39650	Canola	cytosol	45.88	38.21
Bra026760.1-P	Field mustard	cytosol	45.88	38.1
Zm00001d036905_P002	Maize	cytosol	50.9	37.27
PGSC0003DMT400014299	Potato	cytosol	47.31	37.08
Solyc06g052000.1.1	Tomato	cytosol	15.05	23.86
HORVU4Hr1G040280.4	Barley	cytosol, mitochondrion	13.62	11.21

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.2	UniProt:A0A287FSN8	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:HORVU1Hr1G058470	EnsemblPlants:HORVU1Hr1G058470.4	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44239	PANTHER:PTHR44239:SF1	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI000B47A51A	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

No Description!

Coordinates

chrchr1H:-:427091166..427094200

Molecular Weight (calculated)

30923.2 Da

IEP (calculated)

9.945

GRAVY (calculated)

-0.471

Length

279 amino acids

Sequence
(BLAST)

001: RSRRCRRWCW RGHCRRRRLP AGNKACAPPP DPPHRPSTRR RTHPLPCCCL PPPPPSSSGY RRRRPSLGLF WTQTSGVHPS PSSEPAAGAL LSYSPRKIWD
101: ALTGNELHSF EHKHIVRACA FSEDTHMLLT GGVEKILRIY DMNRPDAAPR ELDKTHGSVR TVAWLHIDQS ILSSCSDMGG VSGKIVQTLE TKAPVTSAKV
201: SQDDRFITTA DGSSVKFWDA NHFGLVKSYD MSCTVESASL EPKSGSKFIP MPPSADLLMI SQKIANIMSC LDMIGKHAM

Best Arabidopsis Sequence Match ( AT1G15470.2 )
(BLAST)

001: MGAPLVCHGH SRPVVDVAYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW SCSLDKNAIR AASASADFTA KIWNALTGDE LHSFEHKHIV
101: RACAFSEDTH RLLTGGMEKI LRIFDLNRPD APPKEVGNSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVHTLE TKSPVTSAEV SQDGRYITTA
201: DGSSVKFWDA KNFGLLKSYD MPCNVESASL EPKHGNTFIA GGEDMWVHRF DFQTGEEIGK FLLKKNEVFI LGTCVYPLKP MW

Arabidopsis Description

F9L1.42 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.