CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G15470.1	Thale cress	cytosol	94.03	94.59
CDX81717	Canola	cytosol	92.54	92.26
CDY55992	Canola	cytosol	92.54	92.26
VIT_09s0002g05790.t01	Wine grape	cytosol	78.21	75.72
CDY61819	Canola	cytosol	74.33	75.45
TraesCS5D01G201800.1	Wheat	cytosol	76.12	75.0
TraesCS5B01G194400.1	Wheat	cytosol, golgi	76.12	75.0
HORVU5Hr1G058430.1	Barley	cytosol	76.12	75.0
CDY62165	Canola	cytosol	73.73	74.85
CDY62196	Canola	cytosol	74.63	74.18
TraesCS5A01G189200.2	Wheat	cytosol	76.12	73.7
GSMUA_Achr2P17000_001	Banana	cytosol	75.22	73.68
Os02t0205400-01	Rice	cytosol	74.93	73.39
CDY40132	Canola	cytosol	74.63	73.31
CDX89958	Canola	cytosol	74.63	73.31
GSMUA_Achr6P00680_001	Banana	cytosol	75.82	73.2
Zm00001d046445_P002	Maize	cytosol, extracellular	73.43	72.35
EER90002	Sorghum	cytosol	73.43	72.35
KRH03754	Soybean	cytosol	75.82	72.16
KRH56652	Soybean	cytosol, endoplasmic reticulum, nucleus	75.82	72.16
EES04724	Sorghum	cytosol	73.43	72.14
Os06t0598900-01	Rice	cytosol	73.43	71.93
TraesCS7A01G372500.2	Wheat	cytosol	73.43	71.93
HORVU7Hr1G084630.1	Barley	cytosol	73.13	71.64
TraesCS7D01G350400.1	Wheat	cytosol	73.13	71.22
TraesCS7B01G254800.1	Wheat	cytosol	72.84	70.52
HORVU5Hr1G035620.1	Barley	cytosol	23.28	64.46
Zm00001d036905_P002	Maize	cytosol	73.13	64.3
HORVU7Hr1G085770.1	Barley	cytosol	21.79	59.84
HORVU1Hr1G058470.4	Barley	cytosol, nucleus, plastid	38.21	45.88
CDY34145	Canola	cytosol, mitochondrion	24.18	24.55
CDY13713	Canola	mitochondrion	23.88	23.26
CDY71621	Canola	mitochondrion	23.58	22.97
CDY03970	Canola	cytosol	24.18	11.91

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A078HMC0	EnsemblPlants:CDY39650	ProteinID:CDY39650	ProteinID:CDY39650.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00068221001	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44239
PANTHER:PTHR44239:SF1	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0004EE86D9	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:	:

Description

BnaC05g11790DBnaC05g11790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMC0]

Coordinates

chrLK032453:+:248226..250346

Molecular Weight (calculated)

36740.9 Da

IEP (calculated)

5.381

GRAVY (calculated)

-0.418

Length

335 amino acids

Sequence
(BLAST)

001: MGVPLVCHGH SRPVVDVSYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW SCSLDKHAMR AASASADFTA KIWNALTGDE LHSFEHKHIV
101: RACAFSEDTH LLLTGGMEKI LRIFDMNRPD VPPKEVGGSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVQTLE TKFPVTSAEV SQDGRYITTA
201: DGSSVKFWDA NNFGLLKSYE MPCNIESASL EPKHGNTFIA GGEDMWVHRF DFQTGEEIGC NKGHHGPVHC VRYSPGGESY TSGSEDGTVR IWEVVGSVNH
301: EEKESDQSGN VKLVAEEVVR KAESLRISEK AAEAK

Best Arabidopsis Sequence Match ( AT1G15470.1 )
(BLAST)

001: MGAPLVCHGH SRPVVDVAYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW SCSLDKNAIR AASASADFTA KIWNALTGDE LHSFEHKHIV
101: RACAFSEDTH RLLTGGMEKI LRIFDLNRPD APPKEVGNSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVHTLE TKSPVTSAEV SQDGRYITTA
201: DGSSVKFWDA KNFGLLKSYD MPCNVESASL EPKHGNTFIA GGEDMWVHRF DFQTGEEIGC NKGHHGPVHC VRYAPGGESY TSGSEDGTVR IWVVGSVNHP
301: EESNLSGHVK LVAEEVVRKA ESLRISEKAA EAK

Arabidopsis Description

F9L1.42 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.