Factsheet for HORVU7Hr1G084630.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G350400.1	Wheat	cytosol	98.83	98.26
TraesCS7A01G372500.2	Wheat	cytosol	98.25	98.25
TraesCS7B01G254800.1	Wheat	cytosol	98.25	97.11
Os06t0598900-01	Rice	cytosol	88.3	88.3
Zm00001d046445_P002	Maize	cytosol, extracellular	86.84	87.35
EER90002	Sorghum	cytosol	86.84	87.35
HORVU5Hr1G058430.1	Barley	cytosol	84.5	85.0
HORVU5Hr1G035620.1	Barley	cytosol	29.24	82.64
Bra030366.1-P	Field mustard	cytosol	78.36	81.21
GSMUA_Achr2P17000_001	Banana	cytosol	80.99	80.99
CDY62165	Canola	cytosol	78.07	80.91
CDY61819	Canola	cytosol	77.19	80.0
GSMUA_Achr6P00680_001	Banana	cytosol	80.99	79.83
VIT_11s0016g04710.t01	Wine grape	cytosol	80.99	79.6
Bra018983.1-P	Field mustard	cytosol	77.78	78.93
CDY62196	Canola	cytosol	77.78	78.93
KRH56652	Soybean	cytosol, endoplasmic reticulum, nucleus	80.99	78.69
AT3G15610.1	Thale cress	cytosol	78.07	78.3
AT1G52730.1	Thale cress	cytosol	78.36	78.13
KRH03754	Soybean	cytosol	80.12	77.84
CDX89958	Canola	cytosol	77.49	77.71
CDY40132	Canola	cytosol	76.9	77.13
Zm00001d036905_P002	Maize	cytosol	85.38	76.64
VIT_09s0002g05790.t01	Wine grape	cytosol	77.19	76.3
AT1G15470.1	Thale cress	cytosol	71.93	73.87
CDY55992	Canola	cytosol	71.93	73.21
CDX81717	Canola	cytosol	71.93	73.21
CDY39650	Canola	cytosol	71.64	73.13
Bra026760.1-P	Field mustard	cytosol	71.34	72.62
HORVU7Hr1G085770.1	Barley	cytosol	25.44	71.31
PGSC0003DMT400014299	Potato	cytosol	73.68	70.79
HORVU1Hr1G058470.4	Barley	cytosol, nucleus, plastid	46.78	57.35
Solyc06g052000.1.1	Tomato	cytosol	26.9	52.27
HORVU4Hr1G040280.4	Barley	cytosol, mitochondrion	21.93	22.12

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EMBL:AK360825	EMBL:AK366755	UniProt:F2DAB2	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU7Hr1G084630	EnsemblPlants:HORVU7Hr1G084630.1	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44239
PANTHER:PTHR44239:SF1	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0002006195	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DAB2]

Coordinates

chrchr7H:-:509439437..509447155

Molecular Weight (calculated)

37040.3 Da

IEP (calculated)

6.145

GRAVY (calculated)

-0.343

Length

342 amino acids

Sequence
(BLAST)

001: MEKKKVAVSK VCHGHSRPVV DLFYSPVTPD GYFLISASKD SNPMLRNGDT GDWIGTFEGH KGAVWSSCLD TNALRAASGS ADFSAKIWDA LTGNELHSFE
101: HKHIVRACAF SEDTHMLLTG GVEKILRIYD MNRPDAAPRE LDKTPGSVRT VAWLHSDQSI LSSCSDMGGV RLWDVRSGKI VQTLETKAPV TSAEVSQDGR
201: FITTADGSSV KFWDANHFGL VKSYDMSCTV ESASLEPKSG SKFITGGEDM WVHVYDFFTG EEIACNKGHH GPVHCVRFAP VGESYASGSE DGTIRIWPLN
301: PASTDDAEAP TANGKPKAAA VANEVARKIE GFHISKEGQT EA

Best Arabidopsis Sequence Match ( AT1G52730.1 )
(BLAST)

001: MEKKKVTIPQ VCHGHSRPVV DLFYSPITPD GFFLISASKD SHPMLRNGET GDWIGTFEGH KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE
101: HKHIVRACAF SEDTKSLLTG GFEKILRVFD MNRLDAPPTE VDKSPGSIRT LTWLHSDQTI LSSCTDIGGV RLWDVRSGKI VQTLETKSPV TSAEVSQDGR
201: YITTADGSTV KFWDANHFGL VKSYDMPCNI ESASLEPKSG EKFVAGGEDM WVRVFDFYTG EEIGCNKGHH GPVHCVRFTP TGLSYASGSE DGTIRIWQTT
301: PANPEENETS SRRVKHSVDE VSKKIEGFHI NKEGKTAEKP SDT

Arabidopsis Description

AT1G52730 protein [Source:UniProtKB/TrEMBL;Acc:Q9SSS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.