CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0598900-01	Rice	cytosol	91.76	91.23
HORVU7Hr1G084630.1	Barley	cytosol	87.35	86.84
TraesCS7A01G372500.2	Wheat	cytosol	87.35	86.84
TraesCS5B01G194400.1	Wheat	cytosol, golgi	86.47	86.47
Zm00001d036905_P002	Maize	cytosol	96.76	86.35
TraesCS7D01G350400.1	Wheat	cytosol	87.35	86.34
HORVU5Hr1G058430.1	Barley	cytosol	86.18	86.18
TraesCS7B01G254800.1	Wheat	cytosol	87.65	86.13
TraesCS5D01G201800.1	Wheat	cytosol	85.88	85.88
EES04724	Sorghum	cytosol	85.59	85.34
TraesCS5A01G189200.2	Wheat	cytosol	85.88	84.39
Bra030366.1-P	Field mustard	cytosol	80.88	83.33
CDY62165	Canola	cytosol	80.59	83.03
CDY61819	Canola	cytosol	79.71	82.12
GSMUA_Achr6P00680_001	Banana	cytosol	83.24	81.56
GSMUA_Achr2P17000_001	Banana	cytosol	81.76	81.29
CDY62196	Canola	cytosol	80.0	80.71
Bra018983.1-P	Field mustard	cytosol	80.0	80.71
AT1G52730.1	Thale cress	cytosol	81.18	80.47
KRH56652	Soybean	cytosol, endoplasmic reticulum, nucleus	82.65	79.83
AT3G15610.1	Thale cress	cytosol	80.0	79.77
CDX89958	Canola	cytosol	79.71	79.47
VIT_11s0016g04710.t01	Wine grape	cytosol	81.18	79.31
KRH03754	Soybean	cytosol	82.06	79.26
CDY40132	Canola	cytosol	79.41	79.18
VIT_09s0002g05790.t01	Wine grape	cytosol	79.41	78.03
HORVU5Hr1G035620.1	Barley	cytosol	27.06	76.03
AT1G15470.1	Thale cress	cytosol	72.94	74.47
CDY39650	Canola	cytosol	72.35	73.43
CDY55992	Canola	cytosol	72.06	72.92
CDX81717	Canola	cytosol	71.76	72.62
Bra026760.1-P	Field mustard	cytosol	71.76	72.62
PGSC0003DMT400014299	Potato	cytosol	75.88	72.47
HORVU7Hr1G085770.1	Barley	cytosol	24.12	67.21
Solyc06g052000.1.1	Tomato	cytosol	27.94	53.98
HORVU1Hr1G058470.4	Barley	cytosol, nucleus, plastid	42.35	51.61
EER98031	Sorghum	mitochondrion	22.35	23.31

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	EntrezGene:8082245	UniProt:C5Z5K3	EnsemblPlants:EER90002	ProteinID:EER90002
ProteinID:EER90002.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680
InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR44239	PANTHER:PTHR44239:SF1	SMART:SM00320	EnsemblPlantsGene:SORBI_3010G181600	SUPFAM:SSF50978
unigene:Sbi.5852	UniParc:UPI0001A8996E	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	RefSeq:XP_002438635.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:52075764..52084556

Molecular Weight (calculated)

36868.0 Da

IEP (calculated)

5.859

GRAVY (calculated)

-0.370

Length

340 amino acids

Sequence
(BLAST)

001: MEKKKVAIPL VCHGHSRPVV DLFYSPVTPD GYFLISASKD TNPMLRNGET GDWIGTFQGH KGAVWSCCLD RNALRAASAS ADFSAKVWDA LTGDELHSFE
101: HKHIVRACAF SEDTHLLLTG GMEKTLRVYD MNRPDAAPRE LDKSPGSVRT AAWLHSDQTI LSSCTDMGGV RLWDVRTGKI VQTLETKASV TSAEVSQDGR
201: FITTADGSSV KFWDANHFGL VKSYDMPCNV ESASLEPKSG SKFVAGGEDL WVHVFDFFTG EEIACNKGHH GPVHCVRFAP GGESYASGSE DGTIRIWQLS
301: PANSDDNEAA NANGKTTAGV NEVTTKIEGF HIPKEGQTEG

Best Arabidopsis Sequence Match ( AT1G52730.1 )
(BLAST)

001: MEKKKVTIPQ VCHGHSRPVV DLFYSPITPD GFFLISASKD SHPMLRNGET GDWIGTFEGH KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE
101: HKHIVRACAF SEDTKSLLTG GFEKILRVFD MNRLDAPPTE VDKSPGSIRT LTWLHSDQTI LSSCTDIGGV RLWDVRSGKI VQTLETKSPV TSAEVSQDGR
201: YITTADGSTV KFWDANHFGL VKSYDMPCNI ESASLEPKSG EKFVAGGEDM WVRVFDFYTG EEIGCNKGHH GPVHCVRFTP TGLSYASGSE DGTIRIWQTT
301: PANPEENETS SRRVKHSVDE VSKKIEGFHI NKEGKTAEKP SDT

Arabidopsis Description

AT1G52730 protein [Source:UniProtKB/TrEMBL;Acc:Q9SSS7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.