Factsheet for TraesCS5A01G189200.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G201800.1	Wheat	cytosol	97.69	99.41
TraesCS5B01G194400.1	Wheat	cytosol, golgi	95.95	97.65
HORVU5Hr1G058430.1	Barley	cytosol	95.95	97.65
Os06t0598900-01	Rice	cytosol	86.71	87.72
Zm00001d046445_P002	Maize	cytosol, extracellular	84.39	85.88
EER90002	Sorghum	cytosol	84.39	85.88
TraesCS7A01G372500.2	Wheat	cytosol	83.24	84.21
Bra030366.1-P	Field mustard	cytosol	78.61	82.42
CDY62165	Canola	cytosol	78.32	82.12
GSMUA_Achr2P17000_001	Banana	cytosol	80.35	81.29
GSMUA_Achr6P00680_001	Banana	cytosol	81.5	81.27
CDY61819	Canola	cytosol	77.46	81.21
VIT_11s0016g04710.t01	Wine grape	cytosol	81.21	80.75
CDY62196	Canola	cytosol	78.03	80.12
Bra018983.1-P	Field mustard	cytosol	78.03	80.12
AT3G15610.1	Thale cress	cytosol	78.9	80.06
CDY40132	Canola	cytosol	78.32	79.47
CDX89958	Canola	cytosol	78.03	79.18
KRH56652	Soybean	cytosol, endoplasmic reticulum, nucleus	80.35	78.98
KRH03754	Soybean	cytosol	80.06	78.69
AT1G52730.1	Thale cress	cytosol	77.17	77.84
VIT_09s0002g05790.t01	Wine grape	cytosol	77.17	77.17
Zm00001d036905_P002	Maize	cytosol	84.39	76.64
AT1G15470.1	Thale cress	cytosol	73.41	76.28
CDY39650	Canola	cytosol	73.7	76.12
CDY55992	Canola	cytosol	71.68	73.81
CDX81717	Canola	cytosol	71.68	73.81
Bra026760.1-P	Field mustard	cytosol	71.1	73.21
PGSC0003DMT400014299	Potato	cytosol	74.86	72.75
Solyc06g052000.1.1	Tomato	cytosol	28.03	55.11
TraesCS2A01G511400.1	Wheat	cytosol, mitochondrion	22.25	23.69
TraesCS4A01G166500.1	Wheat	nucleus	21.97	22.42

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44239	PANTHER:PTHR44239:SF1	SMART:SM00320	SUPFAM:SSF50978
EnsemblPlantsGene:TraesCS5A01G189200	EnsemblPlants:TraesCS5A01G189200.2	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	TIGR:cd00200	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:391549134..391553896

Molecular Weight (calculated)

37550.1 Da

IEP (calculated)

5.545

GRAVY (calculated)

-0.292

Length

346 amino acids

Sequence
(BLAST)

001: MEKKKAAVPL VCHGHSRPVV DLFYSPVTPD GYFLISASKD SNPMLRNGET GDWIGTFEGH KGAVWSCCLD TNALRAASGS ADFSAKVWDA LTGDELHSFE
101: HKHIVRACAF SKDTHLLLTG GMEKILRVYD LNKPDVAPKE LDKSPGSVRT VAWLHNDQTI LSSCTDTGGV RLWDVRSEKI VQTLETKGPV TSAEVSQDGR
201: FITTADGSSV KFWDANHFGL VKSYDMSFIV ESASLEPKSG SKFIAGGEDM WVHVFDFLTG EEITLLYCAA CNKGHHGPVH CVRFAPGGES YASGSEDGTI
301: RIWQLSPPNA DAEEAIDTNG KPKAGAEEIA CKIEGFHIAK EEKAGE

Best Arabidopsis Sequence Match ( AT1G15470.1 )
(BLAST)

001: MGAPLVCHGH SRPVVDVAYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW SCSLDKNAIR AASASADFTA KIWNALTGDE LHSFEHKHIV
101: RACAFSEDTH RLLTGGMEKI LRIFDLNRPD APPKEVGNSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVHTLE TKSPVTSAEV SQDGRYITTA
201: DGSSVKFWDA KNFGLLKSYD MPCNVESASL EPKHGNTFIA GGEDMWVHRF DFQTGEEIGC NKGHHGPVHC VRYAPGGESY TSGSEDGTVR IWVVGSVNHP
301: EESNLSGHVK LVAEEVVRKA ESLRISEKAA EAK

Arabidopsis Description

F9L1.42 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI22]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.