Factsheet for PGSC0003DMT400014299

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g120010.2.1	Tomato	nucleus	98.88	98.88
Bra030366.1-P	Field mustard	cytosol	75.28	81.21
CDY62165	Canola	cytosol	75.0	80.91
CDY61819	Canola	cytosol	74.72	80.61
Bra018983.1-P	Field mustard	cytosol	75.0	79.23
CDY62196	Canola	cytosol	75.0	79.23
GSMUA_Achr6P00680_001	Banana	cytosol	76.4	78.39
CDX89958	Canola	cytosol	75.0	78.3
CDY40132	Canola	cytosol	74.44	77.71
GSMUA_Achr2P17000_001	Banana	cytosol	74.44	77.49
AT3G15610.1	Thale cress	cytosol	74.16	77.42
EES04724	Sorghum	cytosol	73.88	77.13
AT1G52730.1	Thale cress	cytosol	73.88	76.68
TraesCS5D01G201800.1	Wheat	cytosol	72.75	76.18
Os02t0205400-01	Rice	cytosol	73.03	76.02
TraesCS5B01G194400.1	Wheat	cytosol, golgi	72.47	75.88
Zm00001d046445_P002	Maize	cytosol, extracellular	72.47	75.88
HORVU5Hr1G058430.1	Barley	cytosol	72.47	75.88
EER90002	Sorghum	cytosol	72.47	75.88
KRH56652	Soybean	cytosol, endoplasmic reticulum, nucleus	75.0	75.85
KRH03754	Soybean	cytosol	74.72	75.57
Os06t0598900-01	Rice	cytosol	72.19	75.15
TraesCS5A01G189200.2	Wheat	cytosol	72.75	74.86
HORVU7Hr1G084630.1	Barley	cytosol	70.79	73.68
TraesCS7A01G372500.2	Wheat	cytosol	70.51	73.39
TraesCS7D01G350400.1	Wheat	cytosol	70.51	72.97
TraesCS7B01G254800.1	Wheat	cytosol	70.22	72.25
HORVU5Hr1G035620.1	Barley	cytosol	23.03	67.77
Zm00001d036905_P002	Maize	cytosol	72.47	67.72
HORVU7Hr1G085770.1	Barley	cytosol	21.35	62.3
HORVU1Hr1G058470.4	Barley	cytosol, nucleus, plastid	37.08	47.31
PGSC0003DMT400023872	Potato	cytosol, mitochondrion	23.03	25.15

Protein Annotations

EntrezGene:102586216	Gene3D:2.130.10.10	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M1A3Z3	PFAM:PF00400	EnsemblPlantsGene:PGSC0003DMG400005609
PGSC:PGSC0003DMG400005609	EnsemblPlants:PGSC0003DMT400014299	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR44239
PANTHER:PTHR44239:SF1	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000296371F	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_006341669.1	:	:

Description

Serine-threonine kinase receptor-associated protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005609]

Coordinates

chr3:-:59408634..59413375

Molecular Weight (calculated)

38599.1 Da

IEP (calculated)

5.369

GRAVY (calculated)

-0.325

Length

356 amino acids

Sequence
(BLAST)

001: MDKKKVVAPL VCHGHSRPVV DLSYSPITPD GFFLISASKD STPMLRNGET GDWIGTFEGH KGAVWSCCLD KHALRAASAS ADFSAKLWDA LTGDVLHSFD
101: HKHIVRACAF SEDTNLLLTG GFEKILRIFD LNRPDAPPRE IDSSPGSVRT VAWLHSDQTI LSSSGDAGGL RLWDVRSGKV VQILETKFPV TSAEVSQDGR
201: YITTADGSSV KFWDANHFGL VKSHDLPCKV ESASLEPKFG NRFIAGGEDM WVHVFDFHTG EEIGCNKGHH GPVHCLRFSP GGESYASGSE DGTIRIWQLG
301: PLGQIEDNST ANGSTTANAN DGMSEVTQKI DELAVSETKK MEETQVDGVE QKVVDA

Best Arabidopsis Sequence Match ( AT3G15610.1 )
(BLAST)

001: MEKKKVATPL VCHGHSRPVV DLFYSPITPD GFFLISASKD SQPMLRNGET GDWIGTFEGH KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE
101: HKHIVRACAF SQDTKYLITG GFEKILRVFD LNRLDAPPTE IDKSPGSIRT LTWLHGDQTI LSSCTDIGGV RLWDVRSGKI VQTLETKSPV TSAEVSQDGR
201: YITTADGSTV KFWDANHFGL VKSYDMPCNI ESASLEPKSG NKFVAGGEDM WVRLFDFHTG KEIGCNKGHH GPVHCVRFAP TGESYASGSE DGTIRIWQTG
301: PVNPEEISES KPKQSVDEVA RKIEGFHINK EGKTAEKPSD A

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9LW17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.