Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39650 | Canola | cytosol | 94.59 | 94.03 |
| CDX81717 | Canola | cytosol | 92.49 | 91.67 |
| CDY55992 | Canola | cytosol | 91.89 | 91.07 |
| Bra026760.1-P | Field mustard | cytosol | 91.29 | 90.48 |
| VIT_09s0002g05790.t01 | Wine grape | cytosol | 79.28 | 76.3 |
| TraesCS5B01G194400.1 | Wheat | cytosol, golgi | 76.28 | 74.71 |
| TraesCS5D01G201800.1 | Wheat | cytosol | 76.28 | 74.71 |
| HORVU5Hr1G058430.1 | Barley | cytosol | 75.98 | 74.41 |
| AT3G15610.1 | Thale cress | cytosol | 75.68 | 73.9 |
| GSMUA_Achr2P17000_001 | Banana | cytosol | 75.68 | 73.68 |
| AT1G52730.1 | Thale cress | cytosol | 75.68 | 73.47 |
| TraesCS5A01G189200.2 | Wheat | cytosol | 76.28 | 73.41 |
| Os02t0205400-01 | Rice | cytosol | 75.38 | 73.39 |
| GSMUA_Achr6P00680_001 | Banana | cytosol | 76.28 | 73.2 |
| EER90002 | Sorghum | cytosol | 74.47 | 72.94 |
| Zm00001d046445_P002 | Maize | cytosol, extracellular | 74.47 | 72.94 |
| EES04724 | Sorghum | cytosol | 74.47 | 72.73 |
| TraesCS7A01G372500.2 | Wheat | cytosol | 74.17 | 72.22 |
| Os06t0598900-01 | Rice | cytosol | 74.17 | 72.22 |
| HORVU7Hr1G084630.1 | Barley | cytosol | 73.87 | 71.93 |
| KRH56652 | Soybean | cytosol, endoplasmic reticulum, nucleus | 75.68 | 71.59 |
| TraesCS7D01G350400.1 | Wheat | cytosol | 73.87 | 71.51 |
| TraesCS7B01G254800.1 | Wheat | cytosol | 73.87 | 71.1 |
| KRH03754 | Soybean | cytosol | 75.08 | 71.02 |
| Zm00001d036905_P002 | Maize | cytosol | 74.47 | 65.09 |
| HORVU5Hr1G035620.1 | Barley | cytosol | 23.42 | 64.46 |
| HORVU7Hr1G085770.1 | Barley | cytosol | 21.62 | 59.02 |
| HORVU1Hr1G058470.4 | Barley | cytosol, nucleus, plastid | 38.74 | 46.24 |
| AT2G46280.2 | Thale cress | mitochondrion | 23.12 | 23.48 |
| AT2G46290.1 | Thale cress | cytosol | 21.92 | 20.56 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | EntrezGene:838117 | UniProt:A0A178WMB4 | ProteinID:AAD39675.1 | ProteinID:AEE29327.1 |
| ArrayExpress:AT1G15470 | EnsemblPlantsGene:AT1G15470 | RefSeq:AT1G15470 | TAIR:AT1G15470 | RefSeq:AT1G15470-TAIR-G | EnsemblPlants:AT1G15470.1 |
| TAIR:AT1G15470.1 | EMBL:AY084604 | Unigene:At.11430 | EMBL:BT000935 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | RefSeq:NP_563978.1 |
| ProteinID:OAP19410.1 | PFAM:PF00400 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR44239 | PANTHER:PTHR44239:SF1 | UniProt:Q9XI22 |
| SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000005EBA7 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | : | : | : | : |
Description
F9L1.42 protein [Source:UniProtKB/TrEMBL;Acc:Q9XI22]
Coordinates
chr1:+:5315507..5317941
Molecular Weight (calculated)
36346.4 Da
IEP (calculated)
6.075
GRAVY (calculated)
-0.402
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAPLVCHGH SRPVVDVAYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW SCSLDKNAIR AASASADFTA KIWNALTGDE LHSFEHKHIV
101: RACAFSEDTH RLLTGGMEKI LRIFDLNRPD APPKEVGNSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVHTLE TKSPVTSAEV SQDGRYITTA
201: DGSSVKFWDA KNFGLLKSYD MPCNVESASL EPKHGNTFIA GGEDMWVHRF DFQTGEEIGC NKGHHGPVHC VRYAPGGESY TSGSEDGTVR IWVVGSVNHP
301: EESNLSGHVK LVAEEVVRKA ESLRISEKAA EAK
101: RACAFSEDTH RLLTGGMEKI LRIFDLNRPD APPKEVGNSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVHTLE TKSPVTSAEV SQDGRYITTA
201: DGSSVKFWDA KNFGLLKSYD MPCNVESASL EPKHGNTFIA GGEDMWVHRF DFQTGEEIGC NKGHHGPVHC VRYAPGGESY TSGSEDGTVR IWVVGSVNHP
301: EESNLSGHVK LVAEEVVRKA ESLRISEKAA EAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.