Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13713 | Canola | mitochondrion | 92.73 | 88.95 |
| CDY71621 | Canola | mitochondrion | 92.12 | 88.37 |
| AT2G46280.2 | Thale cress | mitochondrion | 86.67 | 87.2 |
| PGSC0003DMT400023872 | Potato | cytosol, mitochondrion | 83.33 | 84.36 |
| KRH74580 | Soybean | endoplasmic reticulum | 83.33 | 84.36 |
| Solyc11g017070.1.1 | Tomato | nucleus | 82.12 | 83.13 |
| VIT_01s0011g06630.t01 | Wine grape | cytosol | 81.21 | 82.21 |
| KRH23773 | Soybean | endoplasmic reticulum | 81.21 | 82.21 |
| KRH40031 | Soybean | endoplasmic reticulum | 80.61 | 81.6 |
| AT2G46290.1 | Thale cress | cytosol | 84.55 | 78.59 |
| GSMUA_Achr2P07570_001 | Banana | cytosol | 76.36 | 78.5 |
| Os08t0308100-01 | Rice | nucleus | 76.97 | 77.91 |
| Zm00001d018873_P001 | Maize | plasma membrane | 76.36 | 77.3 |
| Zm00001d007900_P003 | Maize | mitochondrion | 76.06 | 76.99 |
| Os05t0256000-01 | Rice | nucleus, plasma membrane | 75.76 | 76.69 |
| EER98031 | Sorghum | mitochondrion | 75.45 | 76.38 |
| TraesCS4D01G149800.1 | Wheat | plastid | 75.15 | 76.07 |
| TraesCS2B01G539500.1 | Wheat | cytosol, mitochondrion | 74.85 | 75.3 |
| Os11t0606300-01 | Rice | cytosol | 15.45 | 75.0 |
| HORVU4Hr1G040280.4 | Barley | cytosol, mitochondrion | 75.45 | 73.45 |
| TraesCS4A01G166500.1 | Wheat | nucleus | 75.45 | 73.45 |
| TraesCS2A01G511400.1 | Wheat | cytosol, mitochondrion | 72.12 | 73.23 |
| TraesCS4B01G164300.1 | Wheat | golgi | 70.61 | 70.61 |
| GSMUA_Achr11P... | Banana | cytosol | 50.3 | 56.08 |
| Bra033012.1-P | Field mustard | cytosol | 100.0 | 51.81 |
| CDY03970 | Canola | cytosol | 99.7 | 48.38 |
| CDY62165 | Canola | cytosol | 25.15 | 25.15 |
| CDY61819 | Canola | cytosol | 24.85 | 24.85 |
| CDY62196 | Canola | cytosol | 24.85 | 24.33 |
| CDY39650 | Canola | cytosol | 24.55 | 24.18 |
| CDY40132 | Canola | cytosol | 24.85 | 24.05 |
| CDX89958 | Canola | cytosol | 24.85 | 24.05 |
| CDY55992 | Canola | cytosol | 24.24 | 23.81 |
| CDX81717 | Canola | cytosol | 23.94 | 23.51 |
Protein Annotations
| MapMan:17.4.1.3.9 | Gene3D:2.130.10.10 | GO:A0A078H6F7 | UniProt:A0A078H6F7 | EnsemblPlants:CDY34145 | ProteinID:CDY34145 |
| ProteinID:CDY34145.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0001731 | GO:GO:0001732 | GO:GO:0002183 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0006446 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016282 | GO:GO:0019538 | GO:GO:0033290 | EnsemblPlantsGene:GSBRNA2T00056119001 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | HAMAP:MF_03008 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19877 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0004EE7009 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | InterPro:eIF3i |
Description
BnaA02g28950DEukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A078H6F7]
Coordinates
chrLK032330:+:7432..9717
Molecular Weight (calculated)
36406.0 Da
IEP (calculated)
6.796
GRAVY (calculated)
-0.361
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPILMKGHE RPLTFLRYNR DGDMLFSCAK DHTPTLWYAD NGERHGTFRG HNGAVWCCDV SRDSLRLITG SADQSAKLWD VKTGQQLFSF KFGSPARSVD
101: FALGDKLAVI TTDPFMERTS AIHVKRIAED PEDQVSESVL VLESPNGRKR INRAVWGPLN QTIVSGGEDA VLRIWDAETG KLLKESDSEV GHKNTITSLT
201: KSADDSHFIT GSLDKTAKAC LWDMRTLTLL KTYVSGVPVN AVSMSPLLDH VVLGGGQDAS AVTTTDHRAG KFEAKFYDKI LQEEIGGVKG HFGPINALAF
301: NPDGKSFSSG GEDGYVRLHH FDSDYFNIRI
101: FALGDKLAVI TTDPFMERTS AIHVKRIAED PEDQVSESVL VLESPNGRKR INRAVWGPLN QTIVSGGEDA VLRIWDAETG KLLKESDSEV GHKNTITSLT
201: KSADDSHFIT GSLDKTAKAC LWDMRTLTLL KTYVSGVPVN AVSMSPLLDH VVLGGGQDAS AVTTTDHRAG KFEAKFYDKI LQEEIGGVKG HFGPINALAF
301: NPDGKSFSSG GEDGYVRLHH FDSDYFNIRI
001: MTIECVNPEG LRFNQMKSSS HQTLETRMRP ILMKGHERPL TFLRYNRNGD LLFSCAKDHT PTVWFADNGE RLGTYRGHSG AVWCCDISRD SSRLITGSAD
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
101: QTAKLWDVKS GKELFTFKFG APARSVDFSV GDHLAVITTD HFVGTSSAIH VKRIAEDPED QVGDSVLVLQ SPDGKKKINR AVWGPLNQTI VSGGEDAAIR
201: IWDAETGKLL KQSDEEVGHK EAITSLCKAA DDSHFLTGSH DKTAKLWDMR TLTLIKTYTT VVPVNAVAMS PLLNHVVLGG GQDASAVTTT DHRAGKFEAK
301: FYDTILQEEI GGVKGHFGPI NALAFSPDGK SFSSGGEDGY VRLHHFDSNY FNIKI
Arabidopsis Description
Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A178VR74]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.