Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0308100-01 | Rice | nucleus | 85.29 | 17.79 |
| Os05t0256000-01 | Rice | nucleus, plasma membrane | 85.29 | 17.79 |
| GSMUA_Achr2P07570_001 | Banana | cytosol | 79.41 | 16.82 |
| KRH40031 | Soybean | endoplasmic reticulum | 77.94 | 16.26 |
| KRH23773 | Soybean | endoplasmic reticulum | 77.94 | 16.26 |
| VIT_01s0011g06630.t01 | Wine grape | cytosol | 76.47 | 15.95 |
| KRH74580 | Soybean | endoplasmic reticulum | 75.0 | 15.64 |
| PGSC0003DMT400023872 | Potato | cytosol, mitochondrion | 75.0 | 15.64 |
| Solyc11g017070.1.1 | Tomato | nucleus | 75.0 | 15.64 |
| AT2G46280.2 | Thale cress | mitochondrion | 75.0 | 15.55 |
| CDY34145 | Canola | cytosol, mitochondrion | 75.0 | 15.45 |
| CDY71621 | Canola | mitochondrion | 75.0 | 14.83 |
| CDY13713 | Canola | mitochondrion | 75.0 | 14.83 |
| Bra025277.1-P | Field mustard | mitochondrion | 75.0 | 14.83 |
| AT2G46290.1 | Thale cress | cytosol | 70.59 | 13.52 |
| GSMUA_Achr11P... | Banana | cytosol | 54.41 | 12.5 |
| Bra033012.1-P | Field mustard | cytosol | 75.0 | 8.01 |
| CDY03970 | Canola | cytosol | 75.0 | 7.5 |
| Os06t0598900-01 | Rice | cytosol | 29.41 | 5.85 |
| Os02t0205400-01 | Rice | cytosol | 26.47 | 5.26 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:35.1 | UniProt:A0A0P0Y4N2 | ProteinID:BAT14799.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR015943 |
| EnsemblPlantsGene:Os11g0606300 | EnsemblPlants:Os11t0606300-01 | PANTHER:PTHR19877 | UniParc:UPI000393B6B0 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:eIF3i |
Description
Similar to eukaryotic translation initiation factor 3 subunit 2. (Os11t0606300-01)
Coordinates
chr11:+:23398772..23401453
Molecular Weight (calculated)
7377.9 Da
IEP (calculated)
8.537
GRAVY (calculated)
-0.157
Length
68 amino acids
Sequence
(BLAST)
(BLAST)
1: SPFQTGSLDK SAKVVIGGGQ DAMNVTMTNC LAGKFEPKFF HKILQEEIGV KGHFGPINVL AFNPDGWR
001: MRPILMKGHE RPLTFLRYNR EGDLLFSCAK DHTPTLWFAD NGERLGTYRG HNGAVWCCDV SRDSSRLITG SADQTAKLWD VKSGKELFTF KFNAPTRSVD
101: FAVGDRLAVI TTDHFVDRTA AIHVKRIAED PEEQDAESVL VLHCPDGKKR INRAVWGPLN QTIVSGGEDK VIRIWDAETG KLLKQSDEEV GHKKDITSLC
201: KAADDSHFLT GSLDKTAKLW DMRTLTLLKT YTTVVPVNAV SLSPLLNHVV LGGGQDASAV TTTDHRAGKF EAKFYDKILQ EEIGGVKGHF GPINALAFNP
301: DGKSFSSGGE DGYVRLHHFD SDYFNIKI
101: FAVGDRLAVI TTDHFVDRTA AIHVKRIAED PEEQDAESVL VLHCPDGKKR INRAVWGPLN QTIVSGGEDK VIRIWDAETG KLLKQSDEEV GHKKDITSLC
201: KAADDSHFLT GSLDKTAKLW DMRTLTLLKT YTTVVPVNAV SLSPLLNHVV LGGGQDASAV TTTDHRAGKF EAKFYDKILQ EEIGGVKGHF GPINALAFNP
301: DGKSFSSGGE DGYVRLHHFD SDYFNIKI
Arabidopsis Description
TIF3I1Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/Swiss-Prot;Acc:Q38884]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.