Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025277.1-P | Field mustard | mitochondrion | 99.71 | 99.71 |
| CDY71621 | Canola | mitochondrion | 96.22 | 96.22 |
| CDY34145 | Canola | cytosol, mitochondrion | 88.95 | 92.73 |
| AT2G46280.2 | Thale cress | mitochondrion | 83.43 | 87.5 |
| PGSC0003DMT400023872 | Potato | cytosol, mitochondrion | 80.81 | 85.28 |
| KRH74580 | Soybean | endoplasmic reticulum | 80.23 | 84.66 |
| KRH23773 | Soybean | endoplasmic reticulum | 79.65 | 84.05 |
| KRH40031 | Soybean | endoplasmic reticulum | 79.36 | 83.74 |
| Solyc11g017070.1.1 | Tomato | nucleus | 79.07 | 83.44 |
| VIT_01s0011g06630.t01 | Wine grape | cytosol | 78.78 | 83.13 |
| GSMUA_Achr2P07570_001 | Banana | cytosol | 74.42 | 79.75 |
| AT2G46290.1 | Thale cress | cytosol | 81.69 | 79.15 |
| Os08t0308100-01 | Rice | nucleus | 74.71 | 78.83 |
| Os05t0256000-01 | Rice | nucleus, plasma membrane | 74.13 | 78.22 |
| TraesCS4D01G149800.1 | Wheat | plastid | 73.26 | 77.3 |
| Zm00001d018873_P001 | Maize | plasma membrane | 72.97 | 76.99 |
| Zm00001d007900_P003 | Maize | mitochondrion | 72.67 | 76.69 |
| EER98031 | Sorghum | mitochondrion | 72.38 | 76.38 |
| TraesCS2B01G539500.1 | Wheat | cytosol, mitochondrion | 72.38 | 75.91 |
| Os11t0606300-01 | Rice | cytosol | 14.83 | 75.0 |
| HORVU4Hr1G040280.4 | Barley | cytosol, mitochondrion | 73.55 | 74.63 |
| TraesCS4A01G166500.1 | Wheat | nucleus | 73.55 | 74.63 |
| TraesCS2A01G511400.1 | Wheat | cytosol, mitochondrion | 69.48 | 73.54 |
| TraesCS4B01G164300.1 | Wheat | golgi | 68.6 | 71.52 |
| GSMUA_Achr11P... | Banana | cytosol | 50.0 | 58.11 |
| CDY03970 | Canola | cytosol | 88.95 | 45.0 |
| CDY62165 | Canola | cytosol | 23.84 | 24.85 |
| CDY61819 | Canola | cytosol | 23.55 | 24.55 |
| CDY62196 | Canola | cytosol | 23.55 | 24.04 |
| CDY39650 | Canola | cytosol | 23.26 | 23.88 |
| CDY55992 | Canola | cytosol | 23.26 | 23.81 |
| CDY40132 | Canola | cytosol | 23.55 | 23.75 |
| CDX89958 | Canola | cytosol | 23.55 | 23.75 |
| CDX81717 | Canola | cytosol | 22.97 | 23.51 |
Protein Annotations
| MapMan:17.4.1.3.9 | Gene3D:2.130.10.10 | GO:A0A078FMX6 | UniProt:A0A078FMX6 | EnsemblPlants:CDY13713 | ProteinID:CDY13713 |
| ProteinID:CDY13713.1 | InterPro:G-protein_beta_WD-40_rep | GO:GO:0001731 | GO:GO:0001732 | GO:GO:0002183 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005852 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0006446 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016282 | GO:GO:0019538 | GO:GO:0033290 | EnsemblPlantsGene:GSBRNA2T00078138001 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR017986 | HAMAP:MF_03008 | PFAM:PF00400 | PRINTS:PR00320 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19877 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI0004EDDC9D |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | InterPro:eIF3i |
Description
BnaA06g32100DEukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/TrEMBL;Acc:A0A078FMX6]
Coordinates
chrLK032037:-:712253..714390
Molecular Weight (calculated)
38152.1 Da
IEP (calculated)
6.702
GRAVY (calculated)
-0.364
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPILMKGHE RPLTFLRYNR DGDMLFSCAK DHTPTLWYAD NGERHGTYRG HNGAVWCCDV SRDSSRLITG SADQTAKLWD VKTGTQLFSF KFSSPARSVD
101: FSVGDKLAVI TTDPFMERTS AIHVKRIADD PQDQDGESVL VLENPEGRKR INRAVWGPLN QTIVSGGEDA VLRIWDAETG KLLKETDKEV GHKQTITSLC
201: KSADDSHFLT GSLDKTAKAC LPFLLYLLFH NPPVLWDMRT LTLIKTYTSG VPVNAVSMSP LLDHVVIGGG QDASAVTTTD HRAGNFEAKF YDKILQEEIG
301: GVKGHFGPIN ALAFNPDGRS FSSGGEDGYV RLHHFDSDYF NIKI
101: FSVGDKLAVI TTDPFMERTS AIHVKRIADD PQDQDGESVL VLENPEGRKR INRAVWGPLN QTIVSGGEDA VLRIWDAETG KLLKETDKEV GHKQTITSLC
201: KSADDSHFLT GSLDKTAKAC LPFLLYLLFH NPPVLWDMRT LTLIKTYTSG VPVNAVSMSP LLDHVVIGGG QDASAVTTTD HRAGNFEAKF YDKILQEEIG
301: GVKGHFGPIN ALAFNPDGRS FSSGGEDGYV RLHHFDSDYF NIKI
001: MRPILMKGHE RPLTFLRYNR EGDLLFSCAK DHTPTLWFAD NGERLGTYRG HNGAVWCCDV SRDSSRLITG SADQTAKLWD VKSGKELFTF KFNAPTRSVD
101: FAVGDRLAVI TTDHFVDRTA AIHVKRIAED PEEQDAESVL VLHCPDGKKR INRAVWGPLN QTIVSGGEDK VIRIWDAETG KLLKQSDEEV GHKKDITSLC
201: KAADDSHFLT GSLDKTAKLW DMRTLTLLKT YTTVVPVNAV SLSPLLNHVV LGGGQDASAV TTTDHRAGKF EAKFYDKILQ EEIGGVKGHF GPINALAFNP
301: DGKSFSSGGE DGYVRLHHFD SDYFNIKI
101: FAVGDRLAVI TTDHFVDRTA AIHVKRIAED PEEQDAESVL VLHCPDGKKR INRAVWGPLN QTIVSGGEDK VIRIWDAETG KLLKQSDEEV GHKKDITSLC
201: KAADDSHFLT GSLDKTAKLW DMRTLTLLKT YTTVVPVNAV SLSPLLNHVV LGGGQDASAV TTTDHRAGKF EAKFYDKILQ EEIGGVKGHF GPINALAFNP
301: DGKSFSSGGE DGYVRLHHFD SDYFNIKI
Arabidopsis Description
TIF3I1Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/Swiss-Prot;Acc:Q38884]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.