Factsheet for Zm00001d007900_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018873_P001	Maize	plasma membrane	99.39	99.39
EER98031	Sorghum	mitochondrion	98.16	98.16
Os08t0308100-01	Rice	nucleus	91.1	91.1
Os05t0256000-01	Rice	nucleus, plasma membrane	89.57	89.57
TraesCS4D01G149800.1	Wheat	plastid	88.96	88.96
TraesCS2B01G539500.1	Wheat	cytosol, mitochondrion	88.34	87.8
TraesCS4A01G166500.1	Wheat	nucleus	89.57	86.14
HORVU4Hr1G040280.4	Barley	cytosol, mitochondrion	89.26	85.84
TraesCS2A01G511400.1	Wheat	cytosol, mitochondrion	84.66	84.92
TraesCS4B01G164300.1	Wheat	golgi	84.66	83.64
KRH74580	Soybean	endoplasmic reticulum	80.67	80.67
VIT_01s0011g06630.t01	Wine grape	cytosol	80.06	80.06
GSMUA_Achr2P07570_001	Banana	cytosol	77.61	78.82
KRH23773	Soybean	endoplasmic reticulum	78.53	78.53
KRH40031	Soybean	endoplasmic reticulum	78.53	78.53
PGSC0003DMT400023872	Potato	cytosol, mitochondrion	77.91	77.91
Solyc11g017070.1.1	Tomato	nucleus	76.07	76.07
CDY34145	Canola	cytosol, mitochondrion	76.99	76.06
AT2G46280.2	Thale cress	mitochondrion	76.38	75.91
CDY13713	Canola	mitochondrion	76.69	72.67
Bra025277.1-P	Field mustard	mitochondrion	76.69	72.67
CDY71621	Canola	mitochondrion	76.07	72.09
AT2G46290.1	Thale cress	cytosol	74.54	68.45
GSMUA_Achr11P...	Banana	cytosol	51.84	57.09
Bra033012.1-P	Field mustard	cytosol	76.99	39.4
CDY03970	Canola	cytosol	76.99	36.91
Zm00001d046445_P002	Maize	cytosol, extracellular	23.31	22.35
Zm00001d036905_P002	Maize	cytosol	23.62	20.21

Protein Annotations

EntrezGene:103648258	MapMan:17.4.1.3.9	Gene3D:2.130.10.10	UniProt:A0A096Q886	InterPro:G-protein_beta_WD-40_rep	GO:GO:0001731
GO:GO:0001732	GO:GO:0002183	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005852	GO:GO:0006412	GO:GO:0006413	GO:GO:0006446	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016282	GO:GO:0019538
GO:GO:0033290	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	HAMAP:MF_03008	ProteinID:ONM27851.1
ProteinID:ONM27853.1	ProteinID:ONM27854.1	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678	PFscan:PS50082
PFscan:PS50294	PANTHER:PTHR19877	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0001B34281	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d007900	EnsemblPlants:Zm00001d007900_P003
EnsemblPlants:Zm00001d007900_T003	InterPro:eIF3i	:	:	:	:

Description

Eukaryotic translation initiation factor 3 subunit I

Coordinates

chr2:+:242047419..242052474

Molecular Weight (calculated)

36289.7 Da

IEP (calculated)

6.442

GRAVY (calculated)

-0.409

Length

326 amino acids

Sequence
(BLAST)

001: MRPILMKGHE RPLTFLRYNR DGDLLFSCAK DHTPTVWYAD NGDRLGTYRG HNGAVWTCDV SRDSARLITG SADQTAKLWE VSTGKELFSF RFDAPARSVE
101: FAIGDALAVV TTDNFMDHVP TVQVKRIAED IDDQTEESAL VITGIKGRIN RAVWGPLNRT IITAGEDATI RIWDSETGQL LKESDKESGH QKTISSLSKS
201: LDWSHFITGS LDKSAKLWDT RTLTLIKTYV TERPVNAVDI SPTHDTVVLG GGQDAMNVTM TDRRAGKFEA KFYHKILQEE IGGVKGHFGP INALAFNPDG
301: RSFSSGGEDG YVRLHHFDSD YFSIKM

Best Arabidopsis Sequence Match ( AT2G46280.1 )
(BLAST)

001: MRPILMKGHE RPLTFLRYNR EGDLLFSCAK DHTPTLWFAD NGERLGTYRG HNGAVWCCDV SRDSSRLITG SADQTAKLWD VKSGKELFTF KFNAPTRSVD
101: FAVGDRLAVI TTDHFVDRTA AIHVKRIAED PEEQDAESVL VLHCPDGKKR INRAVWGPLN QTIVSGGEDK VIRIWDAETG KLLKQSDEEV GHKKDITSLC
201: KAADDSHFLT GSLDKTAKLW DMRTLTLLKT YTTVVPVNAV SLSPLLNHVV LGGGQDASAV TTTDHRAGKF EAKFYDKILQ EEIGGVKGHF GPINALAFNP
301: DGKSFSSGGE DGYVRLHHFD SDYFNIKI

Arabidopsis Description

TIF3I1Eukaryotic translation initiation factor 3 subunit I [Source:UniProtKB/Swiss-Prot;Acc:Q38884]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.