Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P27040_001 | Banana | cytosol, mitochondrion, nucleus | 63.79 | 62.71 |
| TraesCS5A01G240600.1 | Wheat | plastid | 48.28 | 31.46 |
| EER99015 | Sorghum | plastid | 44.83 | 30.59 |
| TraesCS5B01G238600.1 | Wheat | plastid | 50.0 | 22.83 |
| TraesCS5D01G247100.1 | Wheat | plastid | 48.28 | 21.37 |
| HORVU5Hr1G068770.6 | Barley | nucleus | 50.0 | 18.59 |
| KRH71159 | Soybean | nucleus, plastid | 48.28 | 15.91 |
| KRH50258 | Soybean | nucleus, plastid | 48.28 | 14.97 |
| KRH04631 | Soybean | plastid | 43.1 | 14.88 |
| PGSC0003DMT400066394 | Potato | nucleus | 48.28 | 14.58 |
| Bra018812.1-P | Field mustard | nucleus | 41.38 | 14.55 |
| CDY50958 | Canola | nucleus | 41.38 | 14.46 |
| VIT_03s0063g00670.t01 | Wine grape | nucleus | 53.45 | 14.16 |
| VIT_07s0031g00800.t01 | Wine grape | plastid | 51.72 | 14.15 |
| KRH76992 | Soybean | nucleus, plastid | 48.28 | 14.14 |
| KRH57804 | Soybean | plastid | 44.83 | 14.13 |
| GSMUA_Achr2P22370_001 | Banana | nucleus | 50.0 | 13.94 |
| CDY28100 | Canola | nucleus | 43.1 | 13.51 |
| KRH28480 | Soybean | plastid | 46.55 | 13.17 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 50.0 | 13.06 |
| Solyc01g108610.2.1 | Tomato | nucleus | 48.28 | 12.84 |
| Solyc02g090680.2.1 | Tomato | nucleus | 46.55 | 12.74 |
| AT1G49620.3 | Thale cress | nucleus | 43.1 | 12.5 |
| CDX92305 | Canola | nucleus | 37.93 | 12.5 |
| PGSC0003DMT400040785 | Potato | nucleus | 46.55 | 12.44 |
| CDY22987 | Canola | nucleus | 39.66 | 11.98 |
| CDX99264 | Canola | nucleus | 36.21 | 11.93 |
| Bra001736.1-P | Field mustard | nucleus | 36.21 | 11.86 |
| AT3G19150.1 | Thale cress | nucleus | 39.66 | 11.73 |
| CDX82309 | Canola | nucleus | 37.93 | 11.52 |
| Bra022391.1-P | Field mustard | nucleus | 13.79 | 5.52 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | InterPro:CDI | GO:GO:0003674 | GO:GO:0004861 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0007050 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0071901 |
| EnsemblPlantsGene:GSMUA_Achr10G25130_001 | EnsemblPlants:GSMUA_Achr10P25130_001 | EnsemblPlants:GSMUA_Achr10T25130_001 | UniProt:M0RL87 | PFAM:PF02234 | PANTHER:PTHR10265 |
| PANTHER:PTHR10265:SF39 | UniParc:UPI000296D06B | SEG:seg | : | : | : |
Description
Cyclin-dependent kinase inhibitor 6 [Source:GMGC_GENE;Acc:GSMUA_Achr10G25130_001]
Coordinates
chr10:+:29251308..29251566
Molecular Weight (calculated)
6487.4 Da
IEP (calculated)
3.976
GRAVY (calculated)
-0.431
Length
58 amino acids
Sequence
(BLAST)
(BLAST)
1: MRSGSSPTVG ATTTEAEIEE FFAAAETDQA QRFAEKYNYD VIGDVPLDGR FDWVRINL
001: MSETKPKRDS EYEGSNIKRM RLDDDDDVLR SPTRTLSSSS SSSLAYSVSD SGGFCSVALS EEEDDHLSSS ISSGCSSSET NEIATRLPFS DLEAHEISET
101: EISTLLTNNF RKQGISSSEN LGETAEMDSA TTEMRDQRKT EKKKKMEKSP TQAELDDFFS AAERYEQKRF TEKYNYDIVN DTPLEGRYQW VSLKP
101: EISTLLTNNF RKQGISSSEN LGETAEMDSA TTEMRDQRKT EKKKKMEKSP TQAELDDFFS AAERYEQKRF TEKYNYDIVN DTPLEGRYQW VSLKP
Arabidopsis Description
KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.