CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, plastid

Predictor Summary:

nucleus 4
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90050
KRG90996	nucleus
KRG95622
KRG99255	endoplasmic reticulum
KRG99448	nucleus
KRH04529	nucleus
KRH11866
KRH22479	nucleus
KRH25470	nucleus
KRH26876	nucleus
KRH28363	nucleus
KRH28424	nucleus
KRH32101
KRH35760	nucleus
KRH36887
KRH42252
KRH45568	nucleus
KRH45743	endoplasmic reticulum
KRH56054	nucleus
KRH56424
KRH57973	nucleus
KRH58370
KRH62487
KRH67292
KRH69476	endoplasmic reticulum
KRH69654	nucleus
KRH71335
KRH74510	nucleus
KRH74675	endoplasmic reticulum
KRH77050	nucleus
KRH77118	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19150.1	KRG99255	AT1G70210.1	20407024
AT3G19150.1	KRH45743	AT1G70210.1	20407024
AT3G19150.1	KRH69476	AT1G70210.1	20407024
AT3G19150.1	KRH74675	AT1G70210.1	20407024
AT3G19150.1	KRH56424	AT1G71380.1	20706207
AT3G19150.1	KRH62487	AT1G71380.1	20706207
AT3G19150.1	KRH11866	AT3G48750.1	11449057
AT3G19150.1	KRH36887	AT3G48750.1	11449057
AT3G19150.1	KRH42252	AT3G48750.1	11449057
AT3G19150.1	KRH58370	AT3G48750.1	11449057
AT3G19150.1	KRH04529	AT3G50070.1	20407024
AT3G19150.1	KRH28424	AT3G50070.1	20407024
AT3G19150.1	KRH57973	AT3G50070.1	20407024
AT3G19150.1	KRH77050	AT3G50070.1	20407024
AT3G19150.1	KRG90050	AT3G54650.1	18948957
AT3G19150.1	KRG95622	AT3G54650.1	18948957
AT3G19150.1	KRH32101	AT3G54650.1	18948957
AT3G19150.1	KRH67292	AT3G54650.1	18948957
AT3G19150.1	KRH71335	AT3G54650.1	18948957
AT3G19150.1	KRH22479	AT4G03270.1	20407024
AT3G19150.1	KRH25470	AT4G03270.1	20407024
AT3G19150.1	KRH26876	AT4G03270.1	20407024
AT3G19150.1	KRH56054	AT4G03270.1	20407024
AT3G19150.1	KRG90996	AT4G34160.1	20407024
AT3G19150.1	KRH35760	AT4G34160.1	20407024
AT3G19150.1	KRH28363	AT4G37630.1	20407024
AT3G19150.1	KRH77118	AT4G37630.1	20407024
AT3G19150.1	KRG99448	AT5G10440.1	20407024
AT3G19150.1	KRH45568	AT5G10440.1	20407024
AT3G19150.1	KRH69654	AT5G10440.1	20407024
AT3G19150.1	KRH74510	AT5G10440.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71159	Soybean	nucleus, plastid	57.22	60.8
GSMUA_Achr10P...	Banana	cytosol	14.97	48.28
GSMUA_Achr9P27040_001	Banana	cytosol, mitochondrion, nucleus	13.9	44.07
TraesCS5A01G240600.1	Wheat	plastid	16.04	33.71
PGSC0003DMT400066394	Potato	nucleus	33.16	32.29
EER99015	Sorghum	plastid	13.9	30.59
KRH04631	Soybean	plastid	27.27	30.36
AT3G19150.1	Thale cress	nucleus	31.02	29.59
Bra001736.1-P	Field mustard	nucleus	27.81	29.38
TraesCS5B01G238600.1	Wheat	plastid	19.79	29.13
Solyc01g108610.2.1	Tomato	nucleus	33.69	28.9
VIT_03s0063g00670.t01	Wine grape	nucleus	33.16	28.31
CDX92305	Canola	nucleus	26.2	27.84
KRH76992	Soybean	nucleus, plastid	29.41	27.78
KRH57804	Soybean	plastid	27.27	27.72
AT1G49620.3	Thale cress	nucleus	29.41	27.5
CDX99264	Canola	nucleus	25.67	27.27
CDY22987	Canola	nucleus	27.27	26.56
CDX82309	Canola	nucleus	26.2	25.65
CDY28100	Canola	nucleus	24.6	24.86
Bra018812.1-P	Field mustard	nucleus	21.93	24.85
CDY50958	Canola	nucleus	21.93	24.7
TraesCS5D01G247100.1	Wheat	plastid	17.11	24.43
KRH28480	Soybean	plastid	26.74	24.39
HORVU5Hr1G068770.6	Barley	nucleus	18.18	21.79
GSMUA_Achr2P22370_001	Banana	nucleus	23.53	21.15
GSMUA_Achr10P...	Banana	nucleus, plastid	20.86	17.57
Bra022391.1-P	Field mustard	nucleus	12.83	16.55

Protein Annotations

EntrezGene:100817219	MapMan:13.1.1.3.1	Gene3D:4.10.365.10	EMBL:ACUP02004676	InterPro:CDI	EnsemblPlantsGene:GLYMA_07G211300
GO:GO:0003674	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006464	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0019538	GO:GO:0030234	GO:GO:0071901	UniProt:I1KLY5	EnsemblPlants:KRH50258	ProteinID:KRH50258
ProteinID:KRH50258.1	PFAM:PF02234	PIRSF:PIRSF017811	PANTHER:PTHR10265	PANTHER:PTHR10265:SF39	UniParc:UPI000233837A

Description

hypothetical protein

Coordinates

chr7:+:38264774..38266846

Molecular Weight (calculated)

20853.5 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.361

Length

187 amino acids

Sequence
(BLAST)

001: MGECKRCCSL TVLAMEEPSS SQHSIFKKRK TTATAAHSTS FQLCSSDMQF PHTIVSPEVS FSSACTVVSG EFCSDRSCCS SSHVKDLHSV PSDLQTKGFE
101: TVEDSTSLNF KSFSLLSEFS GDSEESAMIP AKSSAAVLKV KTPPKAEIEE FFAMAEKYEQ KRFTEKYNFD IVRDLPLEGR YQWVRLH

Best Arabidopsis Sequence Match ( AT1G49620.1 )
(BLAST)

001: MSETKPKRDS EYEGSNIKRM RLDDDDDVLR SPTRTLSSSS SSSLAYSVSD SGGFCSVALS EEEDDHLSSS ISSGCSSSET NEIATRLPFS DLEAHEISET
101: EISTLLTNNF RKQGISSSEN LGETAEMDSA TTEMRDQRKT EKKKKMEKSP TQAELDDFFS AAERYEQKRF TEKYNYDIVN DTPLEGRYQW VSLKP

Arabidopsis Description

KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.