Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX99264 | Canola | nucleus | 42.86 | 47.73 |
| CDX92305 | Canola | nucleus | 41.84 | 46.59 |
| CDX82309 | Canola | nucleus | 41.33 | 42.41 |
| CDY22987 | Canola | nucleus | 41.33 | 42.19 |
| Bra001736.1-P | Field mustard | nucleus | 37.24 | 41.24 |
| Bra022391.1-P | Field mustard | nucleus | 30.1 | 40.69 |
| GSMUA_Achr10P... | Banana | cytosol | 11.73 | 39.66 |
| GSMUA_Achr9P27040_001 | Banana | cytosol, mitochondrion, nucleus | 11.73 | 38.98 |
| AT1G49620.3 | Thale cress | nucleus | 33.67 | 33.0 |
| KRH50258 | Soybean | nucleus, plastid | 29.59 | 31.02 |
| KRH71159 | Soybean | nucleus, plastid | 26.53 | 29.55 |
| EER99015 | Sorghum | plastid | 12.76 | 29.41 |
| TraesCS5A01G240600.1 | Wheat | plastid | 13.27 | 29.21 |
| PGSC0003DMT400066394 | Potato | nucleus | 28.06 | 28.65 |
| KRH76992 | Soybean | nucleus, plastid | 25.51 | 25.25 |
| VIT_07s0031g00800.t01 | Wine grape | plastid | 27.04 | 25.0 |
| KRH04631 | Soybean | plastid | 21.43 | 25.0 |
| Solyc01g108610.2.1 | Tomato | nucleus | 27.55 | 24.77 |
| VIT_03s0063g00670.t01 | Wine grape | nucleus | 27.55 | 24.66 |
| TraesCS5D01G247100.1 | Wheat | plastid | 16.33 | 24.43 |
| PGSC0003DMT400040785 | Potato | nucleus | 26.53 | 23.96 |
| KRH28480 | Soybean | plastid | 24.49 | 23.41 |
| TraesCS5B01G238600.1 | Wheat | plastid | 13.78 | 21.26 |
| KRH57804 | Soybean | plastid | 19.9 | 21.2 |
| Solyc02g090680.2.1 | Tomato | nucleus | 22.45 | 20.75 |
| GSMUA_Achr2P22370_001 | Banana | nucleus | 21.94 | 20.67 |
| HORVU5Hr1G068770.6 | Barley | nucleus | 14.29 | 17.95 |
| GSMUA_Achr10P... | Banana | nucleus, plastid | 16.84 | 14.86 |
Protein Annotations
| MapMan:13.1.1.3.1 | Gene3D:4.10.365.10 | EntrezGene:821449 | UniProt:A0A178V747 | UniProt:A6QRA0 | ProteinID:AAL35985.1 |
| ProteinID:AEE76198.1 | ProteinID:AEE76199.1 | EMBL:AF106705 | EMBL:AJ301557 | EMBL:AK229307 | ArrayExpress:AT3G19150 |
| EnsemblPlantsGene:AT3G19150 | RefSeq:AT3G19150 | TAIR:AT3G19150 | RefSeq:AT3G19150-TAIR-G | EnsemblPlants:AT3G19150.1 | TAIR:AT3G19150.1 |
| ProteinID:BAB02955.1 | EMBL:BT030623 | EMBL:BX826140 | InterPro:CDI | ncoils:Coil | GO:GO:0001673 |
| GO:GO:0003674 | GO:GO:0004860 | GO:GO:0004861 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006464 | GO:GO:0006469 |
| GO:GO:0007049 | GO:GO:0007050 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0045736 | GO:GO:0071901 | Symbol:KRP6 | RefSeq:NP_188546.1 | RefSeq:NP_974338.1 |
| ProteinID:OAP01584.1 | PFAM:PF02234 | PIRSF:PIRSF017811 | PO:PO:0000017 | PO:PO:0000245 | PO:PO:0000293 |
| PO:PO:0001009 | PO:PO:0006015 | PO:PO:0006109 | PO:PO:0007624 | PO:PO:0007625 | PO:PO:0009066 |
| PO:PO:0020019 | PO:PO:0020047 | PO:PO:0020148 | PANTHER:PTHR10265 | PANTHER:PTHR10265:SF39 | UniProt:Q0WNX9 |
| UniParc:UPI000004C546 | SEG:seg | : | : | : | : |
Description
KRP6At3g19150 [Source:UniProtKB/TrEMBL;Acc:A6QRA0]
Coordinates
chr3:-:6616330..6617951
Molecular Weight (calculated)
21455.2 Da
IEP (calculated)
4.243
GRAVY (calculated)
-0.794
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MSERKRELAE EASSTSFSPL KKTKLNDSSD SSPDSHDVIV FAVSSSSVAS SAALASDECS VTIGGEESDQ SSSISSGCFT SESKEIAKNS SSFGVDLEDH
101: QIETETETST FITSNFRKET SPVSEGLGET TTEMESSSAT KRKQPGVRKT PTAAEIEDLF SELESQDDKK KQFIEKYNFD IVNDEPLEGR YKWDRL
101: QIETETETST FITSNFRKET SPVSEGLGET TTEMESSSAT KRKQPGVRKT PTAAEIEDLF SELESQDDKK KQFIEKYNFD IVNDEPLEGR YKWDRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.