CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90050
KRG90996	nucleus
KRG95622
KRG99255	endoplasmic reticulum
KRG99448	nucleus
KRH04529	nucleus
KRH11866
KRH22479	nucleus
KRH25470	nucleus
KRH26876	nucleus
KRH28363	nucleus
KRH28424	nucleus
KRH32101
KRH35760	nucleus
KRH36887
KRH42252
KRH45568	nucleus
KRH45743	endoplasmic reticulum
KRH56054	nucleus
KRH56424
KRH57973	nucleus
KRH58370
KRH62487
KRH67292
KRH69476	endoplasmic reticulum
KRH69654	nucleus
KRH71335
KRH74510	nucleus
KRH74675	endoplasmic reticulum
KRH77050	nucleus
KRH77118	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19150.1	KRG99255	AT1G70210.1	20407024
AT3G19150.1	KRH45743	AT1G70210.1	20407024
AT3G19150.1	KRH69476	AT1G70210.1	20407024
AT3G19150.1	KRH74675	AT1G70210.1	20407024
AT3G19150.1	KRH56424	AT1G71380.1	20706207
AT3G19150.1	KRH62487	AT1G71380.1	20706207
AT3G19150.1	KRH11866	AT3G48750.1	11449057
AT3G19150.1	KRH36887	AT3G48750.1	11449057
AT3G19150.1	KRH42252	AT3G48750.1	11449057
AT3G19150.1	KRH58370	AT3G48750.1	11449057
AT3G19150.1	KRH04529	AT3G50070.1	20407024
AT3G19150.1	KRH28424	AT3G50070.1	20407024
AT3G19150.1	KRH57973	AT3G50070.1	20407024
AT3G19150.1	KRH77050	AT3G50070.1	20407024
AT3G19150.1	KRG90050	AT3G54650.1	18948957
AT3G19150.1	KRG95622	AT3G54650.1	18948957
AT3G19150.1	KRH32101	AT3G54650.1	18948957
AT3G19150.1	KRH67292	AT3G54650.1	18948957
AT3G19150.1	KRH71335	AT3G54650.1	18948957
AT3G19150.1	KRH22479	AT4G03270.1	20407024
AT3G19150.1	KRH25470	AT4G03270.1	20407024
AT3G19150.1	KRH26876	AT4G03270.1	20407024
AT3G19150.1	KRH56054	AT4G03270.1	20407024
AT3G19150.1	KRG90996	AT4G34160.1	20407024
AT3G19150.1	KRH35760	AT4G34160.1	20407024
AT3G19150.1	KRH28363	AT4G37630.1	20407024
AT3G19150.1	KRH77118	AT4G37630.1	20407024
AT3G19150.1	KRG99448	AT5G10440.1	20407024
AT3G19150.1	KRH45568	AT5G10440.1	20407024
AT3G19150.1	KRH69654	AT5G10440.1	20407024
AT3G19150.1	KRH74510	AT5G10440.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH28480	Soybean	plastid	73.23	70.73
KRH04631	Soybean	plastid	44.95	52.98
GSMUA_Achr9P27040_001	Banana	cytosol, mitochondrion, nucleus	15.66	52.54
KRH57804	Soybean	plastid	45.45	48.91
GSMUA_Achr10P...	Banana	cytosol	14.14	48.28
VIT_07s0031g00800.t01	Wine grape	plastid	46.97	43.87
TraesCS5A01G240600.1	Wheat	plastid	17.68	39.33
EER99015	Sorghum	plastid	15.15	35.29
Bra018812.1-P	Field mustard	nucleus	28.28	33.94
CDY50958	Canola	nucleus	28.28	33.73
TraesCS5B01G238600.1	Wheat	plastid	19.7	30.71
KRH71159	Soybean	nucleus, plastid	26.77	30.11
TraesCS5D01G247100.1	Wheat	plastid	19.7	29.77
KRH50258	Soybean	nucleus, plastid	27.78	29.41
AT1G49620.3	Thale cress	nucleus	29.29	29.0
CDX99264	Canola	nucleus	25.76	28.98
CDX92305	Canola	nucleus	25.76	28.98
CDY28100	Canola	nucleus	25.76	27.57
Solyc02g090680.2.1	Tomato	nucleus	29.29	27.36
Bra001736.1-P	Field mustard	nucleus	23.23	25.99
AT3G19150.1	Thale cress	nucleus	25.25	25.51
CDY22987	Canola	nucleus	23.74	24.48
PGSC0003DMT400040785	Potato	nucleus	26.77	24.42
GSMUA_Achr2P22370_001	Banana	nucleus	25.25	24.04
GSMUA_Achr10P...	Banana	nucleus, plastid	26.26	23.42
CDX82309	Canola	nucleus	22.22	23.04
HORVU5Hr1G068770.6	Barley	nucleus	17.17	21.79
Bra022391.1-P	Field mustard	nucleus	12.63	17.24

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	EMBL:ACUP02000649	InterPro:CDI	EnsemblPlantsGene:GLYMA_01G185400	GO:GO:0003674
GO:GO:0003824	GO:GO:0004860	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006464	GO:GO:0006469	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0030234	GO:GO:0071901	UniProt:I1J960	EnsemblPlants:KRH76992	ProteinID:KRH76992	ProteinID:KRH76992.1
PFAM:PF02234	PIRSF:PIRSF017811	PANTHER:PTHR10265	PANTHER:PTHR10265:SF39	UniParc:UPI00023BEBCF	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:52082477..52084583

Molecular Weight (calculated)

22080.9 Da

IEP (calculated)

5.200

GRAVY (calculated)

-0.651

Length

198 amino acids

Sequence
(BLAST)

001: MSSQVGVRTR ARAALAMEAA TASSAQPSSK RKKIYDTNHV AKLSKTPRTS SSSFFIPATV TEIVQERCLS PTSSEIPASC CSSNGSIGLD EDRIKLLDLE
101: VESAQVETST CNGGQEIERR EMKSSSELRE NSQEPEPMEI NSHRALSKAK AMPTELELEE FFVAAEKDIQ KRFQDKYNYD IVKDVPLEGR YEWVQLKP

Best Arabidopsis Sequence Match ( AT1G49620.3 )
(BLAST)

001: MSLREMSETK PKRDSEYEGS NIKRMRLDDD DDVLRSPTRT LSSSSSSSLA YSVSDSGGFC SVALSEEEDD HLSSSISSGC SSSETNEIAT RLPFSDLEAH
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP

Arabidopsis Description

KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.