CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90050
KRG90996	nucleus
KRG95622
KRG99255	endoplasmic reticulum
KRG99448	nucleus
KRH04529	nucleus
KRH11866
KRH22479	nucleus
KRH25470	nucleus
KRH26876	nucleus
KRH28363	nucleus
KRH28424	nucleus
KRH32101
KRH35760	nucleus
KRH36887
KRH42252
KRH45568	nucleus
KRH45743	endoplasmic reticulum
KRH56054	nucleus
KRH56424
KRH57973	nucleus
KRH58370
KRH62487
KRH67292
KRH69476	endoplasmic reticulum
KRH69654	nucleus
KRH71335
KRH74510	nucleus
KRH74675	endoplasmic reticulum
KRH77050	nucleus
KRH77118	nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19150.1	KRG99255	AT1G70210.1	20407024
AT3G19150.1	KRH45743	AT1G70210.1	20407024
AT3G19150.1	KRH69476	AT1G70210.1	20407024
AT3G19150.1	KRH74675	AT1G70210.1	20407024
AT3G19150.1	KRH56424	AT1G71380.1	20706207
AT3G19150.1	KRH62487	AT1G71380.1	20706207
AT3G19150.1	KRH11866	AT3G48750.1	11449057
AT3G19150.1	KRH36887	AT3G48750.1	11449057
AT3G19150.1	KRH42252	AT3G48750.1	11449057
AT3G19150.1	KRH58370	AT3G48750.1	11449057
AT3G19150.1	KRH04529	AT3G50070.1	20407024
AT3G19150.1	KRH28424	AT3G50070.1	20407024
AT3G19150.1	KRH57973	AT3G50070.1	20407024
AT3G19150.1	KRH77050	AT3G50070.1	20407024
AT3G19150.1	KRG90050	AT3G54650.1	18948957
AT3G19150.1	KRG95622	AT3G54650.1	18948957
AT3G19150.1	KRH32101	AT3G54650.1	18948957
AT3G19150.1	KRH67292	AT3G54650.1	18948957
AT3G19150.1	KRH71335	AT3G54650.1	18948957
AT3G19150.1	KRH22479	AT4G03270.1	20407024
AT3G19150.1	KRH25470	AT4G03270.1	20407024
AT3G19150.1	KRH26876	AT4G03270.1	20407024
AT3G19150.1	KRH56054	AT4G03270.1	20407024
AT3G19150.1	KRG90996	AT4G34160.1	20407024
AT3G19150.1	KRH35760	AT4G34160.1	20407024
AT3G19150.1	KRH28363	AT4G37630.1	20407024
AT3G19150.1	KRH77118	AT4G37630.1	20407024
AT3G19150.1	KRG99448	AT5G10440.1	20407024
AT3G19150.1	KRH45568	AT5G10440.1	20407024
AT3G19150.1	KRH69654	AT5G10440.1	20407024
AT3G19150.1	KRH74510	AT5G10440.1	20407024

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50258	Soybean	nucleus, plastid	60.8	57.22
GSMUA_Achr10P...	Banana	cytosol	15.91	48.28
GSMUA_Achr9P27040_001	Banana	cytosol, mitochondrion, nucleus	15.34	45.76
TraesCS5A01G240600.1	Wheat	plastid	17.61	34.83
EER99015	Sorghum	plastid	15.34	31.76
KRH04631	Soybean	plastid	30.11	31.55
PGSC0003DMT400066394	Potato	nucleus	34.09	31.25
Bra001736.1-P	Field mustard	nucleus	30.11	29.94
Solyc01g108610.2.1	Tomato	nucleus	35.23	28.44
CDX99264	Canola	nucleus	28.41	28.41
CDX92305	Canola	nucleus	27.84	27.84
KRH57804	Soybean	plastid	28.98	27.72
CDY22987	Canola	nucleus	30.11	27.6
TraesCS5B01G238600.1	Wheat	plastid	19.89	27.56
VIT_03s0063g00670.t01	Wine grape	nucleus	34.09	27.4
CDX82309	Canola	nucleus	29.55	27.23
KRH76992	Soybean	nucleus, plastid	30.11	26.77
AT3G19150.1	Thale cress	nucleus	29.55	26.53
CDY28100	Canola	nucleus	27.27	25.95
AT1G49620.3	Thale cress	nucleus	27.84	24.5
Bra018812.1-P	Field mustard	nucleus	22.73	24.24
CDY50958	Canola	nucleus	22.73	24.1
KRH28480	Soybean	plastid	26.7	22.93
TraesCS5D01G247100.1	Wheat	plastid	17.05	22.9
HORVU5Hr1G068770.6	Barley	nucleus	18.18	20.51
GSMUA_Achr2P22370_001	Banana	nucleus	23.3	19.71
Bra022391.1-P	Field mustard	nucleus	15.91	19.31
GSMUA_Achr10P...	Banana	nucleus, plastid	23.3	18.47

Protein Annotations

EntrezGene:100306496	MapMan:13.1.1.3.1	Gene3D:4.10.365.10	EMBL:ACUP02000873	EMBL:BT090629	UniProt:C6SZM7
InterPro:CDI	EnsemblPlantsGene:GLYMA_02G133700	GO:GO:0003674	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0030234	GO:GO:0071901	EnsemblPlants:KRH71159
ProteinID:KRH71159	ProteinID:KRH71159.1	PFAM:PF02234	PIRSF:PIRSF017811	PANTHER:PTHR10265	PANTHER:PTHR10265:SF39
UniParc:UPI0001B150E2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:13837975..13839732

Molecular Weight (calculated)

19818.0 Da

IEP (calculated)

7.409

GRAVY (calculated)

-0.649

Length

176 amino acids

Sequence
(BLAST)

001: MGECKRCSLT IAAIEQPSSS QHSISKKRKT TASFQLRSSD TQFPDTIVSP EASVSSTGTV VSGDFCSDRS CCSSSHFKDL HSVPSDLQTK GFQTVEDSTN
101: RYFKPFSLLS EFSGDSEESA KSSAAVRKLK TPPQAEIEEF FAMAEKYERK RFTEKYNFDI VRDLPLEGRY QWVRLH

Best Arabidopsis Sequence Match ( AT1G49620.1 )
(BLAST)

001: MSETKPKRDS EYEGSNIKRM RLDDDDDVLR SPTRTLSSSS SSSLAYSVSD SGGFCSVALS EEEDDHLSSS ISSGCSSSET NEIATRLPFS DLEAHEISET
101: EISTLLTNNF RKQGISSSEN LGETAEMDSA TTEMRDQRKT EKKKKMEKSP TQAELDDFFS AAERYEQKRF TEKYNYDIVN DTPLEGRYQW VSLKP

Arabidopsis Description

KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.