CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50958	Canola	nucleus	61.08	68.07
GSMUA_Achr9P27040_001	Banana	cytosol, mitochondrion, nucleus	15.68	49.15
GSMUA_Achr10P...	Banana	cytosol	13.51	43.1
AT1G49620.3	Thale cress	nucleus	41.62	38.5
TraesCS5A01G240600.1	Wheat	plastid	18.38	38.2
EER99015	Sorghum	plastid	16.76	36.47
CDX92305	Canola	nucleus	30.81	32.39
CDX99264	Canola	nucleus	30.81	32.39
VIT_07s0031g00800.t01	Wine grape	plastid	32.43	28.3
TraesCS5D01G247100.1	Wheat	plastid	20.0	28.24
KRH71159	Soybean	nucleus, plastid	25.95	27.27
CDX82309	Canola	nucleus	28.11	27.23
KRH04631	Soybean	plastid	24.32	26.79
KRH57804	Soybean	plastid	26.49	26.63
Solyc01g108610.2.1	Tomato	nucleus	31.35	26.61
PGSC0003DMT400066394	Potato	nucleus	27.57	26.56
KRH76992	Soybean	nucleus, plastid	27.57	25.76
TraesCS5B01G238600.1	Wheat	plastid	17.3	25.2
VIT_03s0063g00670.t01	Wine grape	nucleus	29.73	25.11
KRH50258	Soybean	nucleus, plastid	24.86	24.6
CDY22987	Canola	nucleus	25.41	24.48
KRH28480	Soybean	plastid	27.03	24.39
GSMUA_Achr2P22370_001	Banana	nucleus	25.95	23.08
HORVU5Hr1G068770.6	Barley	nucleus	18.38	21.79
PGSC0003DMT400040785	Potato	nucleus	21.62	18.43
GSMUA_Achr10P...	Banana	nucleus, plastid	21.62	18.02
Solyc02g090680.2.1	Tomato	nucleus	20.54	17.92

Protein Annotations

MapMan:13.1.1.3.1	Gene3D:4.10.365.10	GO:A0A078GNJ2	UniProt:A0A078GNJ2	InterPro:CDI	EnsemblPlants:CDY28100
ProteinID:CDY28100	ProteinID:CDY28100.1	GO:GO:0003674	GO:GO:0004861	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0007049	GO:GO:0007050	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	GO:GO:0030234	GO:GO:0071901	EnsemblPlantsGene:GSBRNA2T00039061001
PFAM:PF02234	PIRSF:PIRSF017811	PANTHER:PTHR10265	PANTHER:PTHR10265:SF39	UniParc:UPI0004EF0829	SEG:seg

Description

BnaC06g02810DBnaC06g02810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNJ2]

Coordinates

chrLK032214:+:179493..180606

Molecular Weight (calculated)

20548.3 Da

IEP (calculated)

4.365

GRAVY (calculated)

-0.937

Length

185 amino acids

Sequence
(BLAST)

001: MNEMSERDSK ETSFEGSSIK RMRLELDGDD SAVSRSQERT VSSSLAYSAS DSEDEDHRSS SVSSGCSSSE IARDTGLPFL DLEAQQQISE TEVSSLITIN
101: FSRAQGSPSS EILGEMDSAT TTTKTERRVG QKQEKKAKAP TQAELDDFFS AAERGQQKRF TDKYNYDIVN DTPLEGRYEW VSLKP

Best Arabidopsis Sequence Match ( AT1G49620.3 )
(BLAST)

001: MSLREMSETK PKRDSEYEGS NIKRMRLDDD DDVLRSPTRT LSSSSSSSLA YSVSDSGGFC SVALSEEEDD HLSSSISSGC SSSETNEIAT RLPFSDLEAH
101: EISETEISTL LTNNFRKQGI SSSENLGETA EMDSATTEMR DQRKTEKKKK MEKSPTQAEL DDFFSAAERY EQKRFTEKYN YDIVNDTPLE GRYQWVSLKP

Arabidopsis Description

KRP7Cyclin-dependent kinase inhibitor family protein [Source:TAIR;Acc:AT1G49620]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.